Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 114 1e-20
seq95989 93.3 4e-14
seq39385 86.0 6e-12
>seq100917
Length=15418
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| |||| | |||| || | ||||| ||| || ||||| |||||||||||||||||
Sbjct 7787 GCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCT 7728
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| ||| || |||||| | ||||| ||||| | |||| || |||||||| |||||
Sbjct 7727 TAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGG 7668
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
||||| || ||||| ||| || || | | || | ||||||| || || ||
Sbjct 7667 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCAC 7608
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | || | ||||| || || | ||| || |||||||| |||||
Sbjct 7607 TTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560
>seq95989
Length=12046
Score = 93.3 bits (102), Expect = 4e-14
Identities = 94/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| | ||| | ||| ||||||| |||||||||||||| ||||| ||||| ||
Sbjct 11928 CCTCCTCTGAGACGAAGAACCAAATGAAGAGTAGATTCTTTTTGGATGTTATAATCACTT 11987
Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| |||| || | || || |||||||| || || | |||| |||||||||||||||||
Sbjct 11988 AAAGTGCGTCCA-TCCTCTAGTTGTTTGCCTGCGAATATCAATCGTTGCTGATCGGGAGG 12046
>seq39385
Length=5141
Score = 86.0 bits (94), Expect = 6e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 142997 TTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATC 143056
|| || || || |||||||| | ||| || ||||| |||||||| ||||| |||||
Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147
Query 143057 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
|| || |||||||||||||| |||||||| |||||
Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTC 112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506370840284400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |