Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq95739 120 4e-22 seq52387 89.7 8e-13 >seq95739 Length=7868 Score = 120 bits (132), Expect = 4e-22 Identities = 575/892 (64%), Gaps = 33/892 (4%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| || |||| | || | ||| ||||||| ||||| |||| || || |||| Sbjct 1189 TGTTTCCAATTGAGTATTACGATTTATGGCAAATGTATAAAAAATCTCAAGCTTCGTTTT 1130 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAG-GACCTGTACGATTGGGAGACTCGTTTGACT 125114 |||| || || ||||| ||||| | | | || | | |||||| | | |||| Sbjct 1129 GGACAGTAGAGGAGGTTGATCT-TGGACGTGATCGATTTGATTGGAATAACAAATTGAAC 1071 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 | ||||| | ||| |||| | ||| | || || ||||||| |||||||| Sbjct 1070 GCGGATGAGCAACGTTTTTTATCATATATTCTCGCATTTTTTGCCGCAAGTGATGGAATT 1011 Query 125175 GTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 || || || ||||| | || |||||| | |||| | || |||| | || Sbjct 1010 GTTAATGAAAATCTCGCAGA-ACGATTTATACGAGAGGTTCAGGTTACAGAAGCACGTTG 952 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||||| ||||| ||||| ||||| || ||||| || |||||||| || | || | Sbjct 951 TTTTTATGGATTTCAAATTGCCATTGAAAATGTGCATTCAGAAATGTATTCCATGCTTTT 892 Query 125294 TGACATGTACATTCGCGATCCGCAACGTA-AACACATGCTCTT---TAACGCAATCGACA 125349 | | |||||| ||| |||||| | ||| |||| || ||| |||||||| | Sbjct 891 GCAAACATACATT---GATT-GCAACGAACAACGTTTGCTTTTATTTAATGCAATCGAAA 836 Query 125350 CGGTGCCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATT-CGGTGGAT--CGATGACGAC 125405 | |||| | | | | | ||||| |||| ||| | ||| || ||||| | | | || Sbjct 835 CATTGCCATGTGTCAAGCGAAAAG-CTCAGTGG-TCATTACGCTGGATTTCAAGTAGTAC 778 Query 125406 AAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCG 125465 | | |||| | || | | || ||||| || || || || || || || || Sbjct 777 AGAT--TCGTTTTCTGAACGTTTAGTTGCATTTGCTGCTGTCGAAGGTATATTTTTCAGT 720 Query 125466 GGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 ||| ||||||||||| |||||| |||| | || || | || | || |||| Sbjct 719 GGTTCCTTTGCGGCCATATTTTGGATCAAACAACGTGGTATACTGTCTGGTTTGACTTTT 660 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 || || || || || ||||| || || || ||||||||||||||||| |||| | ||| Sbjct 659 AGCAATGAATTAATCTCTCGTGATGAAGGACTACACTGTGACTTTGCATGTCTAGTATTT 600 Query 125586 CGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACC 125645 || ||| | || | || | | ||| | || || | | | | ||| | Sbjct 599 CGTCGATATATCCG------CTACAAACCTAGCCAAGAGAAAATTAGCGAAATTATTCGA 546 Query 125646 GATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGC 125705 || ||||| || |||||||| ||||||| || | |||| || | || ||| Sbjct 545 GAAGCCGTTTTAATTGAACAAGAATTTCTAATTGATGCATTACCAGTTTCTTTAATCGGC 486 Query 125706 ATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765 ||||| || ||| ||| ||||||| || ||||| || ||| || || || Sbjct 485 ATGAATTGTTCGCTTATGAAACAGTACATTGAATTTGTTGCCGATAAGCTTCTTATTGAA 426 Query 125766 TT-GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATA-- 125822 || || || || || || | || | ||||| |||||||| ||| |||||| Sbjct 425 TTGGAATGTCC-AAAAATATTTTGCGTGGAAAATCCATTTGATTTTATG--GAGCATATT 369 Query 125823 TCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA-CAAA 125873 ||| | || || || | ||| |||||||| || || || | ||||| |||| Sbjct 368 TCATTGGAAGGAAAAAGCAATTTTTTCGAAAAAAAAGTTGGAGAGTATCAAA 317 >seq52387 Length=8210 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 70346 GGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACC 70405 |||||||| ||||| || ||||| ||||| ||||||| ||||||||||| ||||| || Sbjct 1388 GGTGTACCGTTTAATATCGCAAGTTATTCATTGTTGACTCACATGATTGCGCACATAACT 1329 Query 70406 GGCCTGAA-AGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCA 70464 || |||| |||| || || | || ||||| || ||||| || | ||| | |||| Sbjct 1328 GGTATGAATAGCG-GTGACTTTATCCATACCATCGGTGACGCGCATATATATCTCGATCA 1270 Query 70465 CATCGAGCCATTAAAG 70480 |||||| ||| | ||| Sbjct 1269 CATCGAACCACTCAAG 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740118564294200