Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 120 2e-22
seq31699 87.8 1e-12
seq94648 82.4 6e-11
>seq100917
Length=15418
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195
||| ||||||| | | || | |||||| || || ||||| |||||||||||||||||
Sbjct 7787 GCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCT 7728
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
||| |||| |||||||||| |||||||||||| ||||||| || || || || ||
Sbjct 7727 TAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGG 7668
Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||| || || ||||| ||| || ||| ||| | || ||||| || || ||
Sbjct 7667 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCAC 7608
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | || || || ||||| || || || || || || || ||||| ||
Sbjct 7607 TTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557
>seq31699
Length=2351
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Minus
Query 91638 ATTTCCTAAATCGCCGACGTGTCGTTCAATTG--CATTTGGCGCGCCGTGATCGTGTCCG 91695
||| || ||||||||||| |||| | ||| | | || |||||||| || | |
Sbjct 592 ATTACCCAAATCGCCGACATGTCTATT--TTGATCCTCCGGAGCGCCGTGTTCTTTGTTG 535
Query 91696 GTGGGATTGAAATGCTCACCAGCAGATGTGCAACCGTTAGTTGTGTCGCCGAACTCGTGC 91755
|||||||||| ||| ||| ||||||||||| || ||||| |||| ||||| ||||||
Sbjct 534 TTGGGATTGAAGTGCGGACCGGCAGATGTGCAGCCATTAGTGTTGTCACCGAATTCGTGC 475
Query 91756 ACATGAAAACCGTG 91769
|||||||| || ||
Sbjct 474 ACATGAAAGCCATG 461
>seq94648
Length=7301
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| ||||||| | | ||| | ||| | || || ||||| | ||| | |||||||||
Sbjct 2467 CCGCCTCTCAGGCGAAGAACCAGATGTAACGTCGAGTCTTTCTTTATTTCATAATCGCTT 2526
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| ||| || ||||||| ||||||||||| |||||||||| | || ||| ||
Sbjct 2527 AAAATCCTTTCGTCTTCCAATTGTTTGCCGGCGTATATCAGTCTCTGCATGTCTGCAGGC 2586
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
| || ||| | ||| ||| || |||||| | || | || || | | ||| ||
Sbjct 2587 ACACCCTCTCTCTCAGCAATCTTCGCCTTTACCAGTTGGACAGTGTCCGTCTGTTCCACT 2646
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTAC 15351
||||| | ||| |||||||| |||| || || ||
Sbjct 2647 TCTAACGCAATTGTTTTACCATTCAGTGTCTTCAC 2681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361730974378845
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |