Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq40065 113 3e-20 seq100917 95.1 9e-15 >seq40065 Length=761 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT--TAATTGACGCTCATCGT 43970 |||||||| || ||| ||| | || | ||||||| | ||| | ||||| || | Sbjct 564 ACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAATCACTGATAACT--CGCTCGTCTT 507 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 ||| |||||| || |||||||| | || ||| ||||| ||| | ||| |||||||| | Sbjct 506 CCAGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTCAACAGGCAAACCCTCTTTATCGG 447 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||| || || |||| |||||| |||| ||| ||||| || | ||||||||||| Sbjct 446 TAATCTTCGACTTAACCACTTGAACAGTGTCTGTCGGTTCCACGTCTAACGTAATTGTTT 387 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCATGTCG 44125 | || | | |||||||| ||||| ||||| ||| Sbjct 386 TGCCATTCAGTGTCTTCACGAATATATGCATTTCG 352 >seq100917 Length=15418 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 || ||||||| | | ||||| ||| || || |||||| || || || |||||| || Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | || || || ||||| || || ||||||||||| ||||| || |||| Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | || || || || ||| || || || | | | || || | ||||||||| Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||| ||| ||||| ||||| || | |||||||| ||||| ||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354338534448660