Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq100917 82.4 6e-11 >seq100917 Length=15418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC-GTCCT 48575 ||| | ||||||||| ||| || || ||||||||||| || | ||| || ||| | Sbjct 7769 CACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATC-GCTTAGTGTTCTTCCGTCTT 7711 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | | ||| || || || | || || ||||||||||| || | | ||||||||| Sbjct 7710 CTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCT 7651 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| ||| ||| | | | | ||||| || | | |||| |||| || || || | Sbjct 7650 GAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAGCGTGATTGTCT 7591 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTC 48732 |||| ||||| || ||||| || |||||||| |||| Sbjct 7590 TACCAGTGAGTGTCTTCACGAATATCTGCATTTTGTC 7554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420729868071545