Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq92730 93.3 5e-14 >seq92730 Length=2927 Score = 93.3 bits (102), Expect = 5e-14 Identities = 207/307 (67%), Gaps = 8/307 (3%) Strand=Plus/Minus Query 164391 AAATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTT 164450 ||| ||| |||| || |||||| | || ||||| || ||||||| || || Sbjct 1718 AAACTGGGATTTCGAGAGTATGGGAATCGGAGGACTGGACAAAGAATTTAACGCCATATT 1659 Query 164451 CAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAA 164510 ||||||| |||||||| ||| |||| |||||||| || | ||||| | || Sbjct 1658 TCGACGAGCGTTTGCTTCCAGAGTTTTTCCACCGGAAATAATCGAACAGTTAGGTTTGAA 1599 Query 164511 ACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCG 164570 |||| | |||||| | ||| ||| || || || ||||||||||||||||| || Sbjct 1598 ACATGTGCGCGGAATTCTGTTATTTGGTCCGCCAGGAACTGGTAAAACATTAATGGCGCG 1539 Query 164571 ATGCATTGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAAT 164626 | || | || || | || || ||| || || ||| || || ||||| || | Sbjct 1538 ACAAATCGGTC-AGATGTTGAA-CGCAAGAGAGCC--TAAGATAGTGAATGGCCCGCAGA 1483 Query 164627 TATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTG 164686 | ||| | |||||||| || || || || |||||| | ||||| || || || || | Sbjct 1482 TTTTGGATAAATATGTTGGCGAATCGGAGGCTAATATAAGAAAATTATTCGCTGACGCGG 1423 Query 164687 AAGAAGA 164693 ||||||| Sbjct 1422 AAGAAGA 1416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595115652222000