Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq91925 131 9e-26 >seq91925 Length=7677 Score = 131 bits (144), Expect = 9e-26 Identities = 348/521 (67%), Gaps = 13/521 (2%) Strand=Plus/Minus Query 3620 GAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTA 3679 |||||| | ||||| ||||| ||||||| ||||| || |||||| ||||||||| || Sbjct 1092 GAATTGCTTTATTTCGCTGATATATGCGCAGGTCCTGGAGGTTTCTCTGAATATATTTTG 1033 Query 3680 TGGAGAAAGAAATGGAATATCAAAGGT-TATGGTATGACGTTACGCGaaaaaaaTGATTT 3738 | | |||| |||| || ||||||| | |||| | || | | |||||||| Sbjct 1032 TATAAAAAGGGATGGCAT-TCAAAGGGATTTGGTTTCACACTTAAAGGTGCGAATGATTT 974 Query 3739 TCAACTGAACAGATTT-TACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGC 3797 ||| | | |||||| | | | | | | ||||| || | || | |||||| | Sbjct 973 -CAAGTTAGAAGATTTCTTTGCTGGTTCTCCTGAAACATTCGAACCACACTATGGTATGG 915 Query 3798 TTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAA-ATGATTATG 3856 | | || || ||||||| || | ||||||| | ||| | || ||| | | Sbjct 914 ATGAAGACGGAGATATCTATAAACCTCAAAATCTCATCTCATTTCGAGATTATG-TGCTT 856 Query 3857 AAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAG 3916 || | || || ||| || || || || | ||||||||||| ||||| || ||||| Sbjct 855 AAGAACACTGATGGA---GGCGTGCACTTCGTTATGGCTGACGGAGGGTTTTCTGTTGAA 799 Query 3917 GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATT 3976 || ||||||||||| |||||||| | || |||| | ||||||||||||| | | | Sbjct 798 GGACAAGAAAATATTCAAGAAATTATGTCTAAAAGACTATATTTGTGTCAATTTGTTTGT 739 Query 3977 GCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACA 4036 || | || ||||| ||| || |||| |||||| || || || ||||| Sbjct 738 GCTCTCGCAATATTACGACAAAATGGAAGTTTTGTTTGCAAATTATTTGACATTTTTACG 679 Query 4037 CCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTC 4096 || || |||| ||||||||| ||| | ||||| ||| | || || | ||| || Sbjct 678 CCATTCAGTGTTGGTTTAGTATATCTAATGTACAGAGCATTCAAACACGTTTCCATACAT 619 Query 4097 AAACCACATTCATC--GCGACCGGCCAATTCTGAAAGATAT 4135 |||||| | || | ||||| || |||||||| ||||| Sbjct 618 AAACCAAA--CAGCAGTCGACCAGCAAATTCTGAGCGATAT 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276211342882135