Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq91925 131 9e-26
>seq91925
Length=7677
Score = 131 bits (144), Expect = 9e-26
Identities = 348/521 (67%), Gaps = 13/521 (2%)
Strand=Plus/Minus
Query 3620 GAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTA 3679
|||||| | ||||| ||||| ||||||| ||||| || |||||| ||||||||| ||
Sbjct 1092 GAATTGCTTTATTTCGCTGATATATGCGCAGGTCCTGGAGGTTTCTCTGAATATATTTTG 1033
Query 3680 TGGAGAAAGAAATGGAATATCAAAGGT-TATGGTATGACGTTACGCGaaaaaaaTGATTT 3738
| | |||| |||| || ||||||| | |||| | || | | ||||||||
Sbjct 1032 TATAAAAAGGGATGGCAT-TCAAAGGGATTTGGTTTCACACTTAAAGGTGCGAATGATTT 974
Query 3739 TCAACTGAACAGATTT-TACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGC 3797
||| | | |||||| | | | | | | ||||| || | || | |||||| |
Sbjct 973 -CAAGTTAGAAGATTTCTTTGCTGGTTCTCCTGAAACATTCGAACCACACTATGGTATGG 915
Query 3798 TTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAA-ATGATTATG 3856
| | || || ||||||| || | ||||||| | ||| | || ||| | |
Sbjct 914 ATGAAGACGGAGATATCTATAAACCTCAAAATCTCATCTCATTTCGAGATTATG-TGCTT 856
Query 3857 AAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAG 3916
|| | || || ||| || || || || | ||||||||||| ||||| || |||||
Sbjct 855 AAGAACACTGATGGA---GGCGTGCACTTCGTTATGGCTGACGGAGGGTTTTCTGTTGAA 799
Query 3917 GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATT 3976
|| ||||||||||| |||||||| | || |||| | ||||||||||||| | | |
Sbjct 798 GGACAAGAAAATATTCAAGAAATTATGTCTAAAAGACTATATTTGTGTCAATTTGTTTGT 739
Query 3977 GCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACA 4036
|| | || ||||| ||| || |||| |||||| || || || |||||
Sbjct 738 GCTCTCGCAATATTACGACAAAATGGAAGTTTTGTTTGCAAATTATTTGACATTTTTACG 679
Query 4037 CCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTC 4096
|| || |||| ||||||||| ||| | ||||| ||| | || || | ||| ||
Sbjct 678 CCATTCAGTGTTGGTTTAGTATATCTAATGTACAGAGCATTCAAACACGTTTCCATACAT 619
Query 4097 AAACCACATTCATC--GCGACCGGCCAATTCTGAAAGATAT 4135
|||||| | || | ||||| || |||||||| |||||
Sbjct 618 AAACCAAA--CAGCAGTCGACCAGCAAATTCTGAGCGATAT 580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276211342882135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |