Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq94648 93.3 4e-14 >seq94648 Length=7301 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | || ||||| | || || || || || |||||||||||||| Sbjct 5066 CCACCTCTGAGACGAAGAACTAAGTGAAGTGTCGACTCTTTCTGTACGTTATAATCGCTT 5125 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | | ||| | || ||||| ||||| |||||||| || | ||||||||| || || Sbjct 5126 AAAACTCGTTCG--TCTTCCAGTTGTTTGCCGCCAAATATCAGTCTTTGCTGGTCAACAG 5183 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| | ||||| || ||| |||| ||| || ||| |||| | | || | Sbjct 5184 GAATGCTCTCTTTATCGGCAATCTTTGACTTTACCAGTTGAACACTGTCTGTCGGTTCCA 5243 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| | ||| || ||||| ||| | | || || |||||||||||||| Sbjct 5244 CGTCTAACGTAATAGTTTTGCCATTCAATGTCTTAACAAAGATCTGCAT 5292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447722178376200