Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq100917 113 4e-20 seq44500 96.9 3e-15 seq94648 95.1 1e-14 seq39385 95.1 1e-14 >seq100917 Length=15418 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||||||||| | || || || ||| | ||||| || | || || ||||||| ||| Sbjct 7555 ACAAAATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGC 7614 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 | |||||||||||| | || || |||||| ||||| || ||||| ||||| | Sbjct 7615 CGTCGGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTG 7674 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| ||| | |||| | || ||||| || | ||||| | |||| | ||||||| Sbjct 7675 ATCAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATT 7734 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | ||||| || ||||| || ||| ||||| | ||| | | ||||||| || Sbjct 7735 ACAACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGG 7786 >seq44500 Length=545 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 ||||| || | | ||| |||||||| | ||||| ||||||| || || |||||| Sbjct 47 GAAGTGGAACCAAGCGATTCCATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGC 106 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || ||||||||||| |||| |||||| | | ||||| ||||| ||||||| |||| Sbjct 107 ATTCCTCCCGATCAGCAGATACTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACA 166 Query 24156 GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCA 24193 ||| ||||| |||||| | || || | ||| |||| Sbjct 167 CTCAATGATTACAACATTGAGAAGGATTGCACACTTCA 204 >seq94648 Length=7301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||||| | ||| ||| | ||||| | || || || | | Sbjct 5293 AATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGAC 5234 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| | | | || || ||||||| |||| ||||| |||| ||| || || Sbjct 5233 AGACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCA 5174 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || |||||||| | |||||||| ||||| ||||| || || | ||||||||||| Sbjct 5173 GCAAAGACTGATATTTGGCGGCAAACAACTGGAAGACGAACGAGTTTTAAGCGATTATAA 5114 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 | | || ||||| || ||| |||| ||||| Sbjct 5113 CGTACAGAAAGAGTCGACACTTCACTTAGT 5084 >seq39385 Length=5141 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| |||||||| ||||||||||| ||| ||||||| | || ||||| ||||| ||| Sbjct 112 GACAAGGAAGGCATTCCTCCCGATCAGCAGCGACTGATCTTCGCTGGCAAACAACTGGAA 171 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAA 24178 |||| |||| ||||||||||||| ||||| || Sbjct 172 GATGGAAGAACACTCAGCGATTATAATATTCAGAA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429403919939475