Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq101445 111 1e-19 seq94648 91.5 1e-13 >seq101445 Length=6345 Score = 111 bits (122), Expect = 1e-19 Identities = 111/142 (78%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 115373 ATTGCCGATAAAGAAGG--CGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAAC 115430 ||||||||||||||||| | || || ||| |||| ||||||| | ||| ||||||| Sbjct 1400 ATTGCCGATAAAGAAGGATCATCACCA--GATAAGCAGCGACTTATGTTTGCCGGCAAAC 1343 Query 115431 AATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATA 115490 | || ||||||||||||| ||||||||||||| || |||| |||| ||||| ||| Sbjct 1342 ACTTGGAAGATGACAAAAAACTGGCCGATTATAATATACAAAGAGAGAACACTATCTATA 1283 Query 115491 TGGTGTTGAGATTGCGAGGAGG 115512 |||| | ||||||| ||||| Sbjct 1282 TGGTTATCGGATTGCGTGGAGG 1261 >seq94648 Length=7301 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || | | || ||||| ||||| | || ||| | | Sbjct 5293 AATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGAC 5234 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||| |||| || ||||| ||| |||||||||||||| || | || ||||| || Sbjct 5233 AGACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCA 5174 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||| || | || ||||||||| | ||||| || | | ||||||||| Sbjct 5173 GCAAAGACTGATATTTGGCGGCAAACAACTGGAAGACGAACGAGTTTTAAGCGATTATAA 5114 Query 115465 CATTCAAAAAGAGTCTAC 115482 | | || |||||||| || Sbjct 5113 CGTACAGAAAGAGTCGAC 5096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424817602905400