Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq100917 136 3e-27 >seq100917 Length=15418 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| ||||| || ||||| | || ||||| | ||||| ||||||||||| |||| Sbjct 7559 AATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCGTC 7618 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| |||||| |||| || || | ||| ||||| || || ||||| ||||| | Sbjct 7619 GGACACCATCGAGAATGTGAAGGCGAAGATTCA-GGACAAGGAGGGCATTCCTCCTGATC 7677 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | |||||| | || || || |||||||| |||||||| | | || | ||||||||| Sbjct 7678 AGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTACA 7737 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || || ||||| || || || ||| | ||||| | || ||||| || Sbjct 7738 ACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGG 7786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432791722069175