Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq95739 291 9e-74
seq96803 250 3e-61
seq67252 165 9e-36
seq95975 113 5e-20
seq77187 100 3e-16
>seq95739
Length=7868
Score = 291 bits (322), Expect = 9e-74
Identities = 610/895 (68%), Gaps = 28/895 (3%)
Strand=Plus/Plus
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
|||||| || || |||||||||||||| || ||||| | ||||||||||| || ||
Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374
Query 92862 ATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919
| || | | |||||| | || | |||| |||| | || | | | ||
Sbjct 375 CTCCATAAAATCAAATGGATTTTCCACGCAA-AATATTTTTGGACATTCCAATTCAATAA 433
Query 92920 TAATCT-ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAA 92978
|| || ||| || |||||||| |||||||| ||| | ||||||||| || | |
Sbjct 434 GAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAACAATTCATGCCGATTA 493
Query 92979 GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038
| || |||| || || | | || |||| || |||| |||||||||| | |
Sbjct 494 AAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAA 553
Query 93039 TTTCTATTACTCTACTATTTGGT-GGTTTTTGTACGACATA---ATTGTACATTAAGCAC 93094
|||| | | | | || || | | ||||| | || ||| | | | || ||
Sbjct 554 TTTCGCTAATTTT-CTCTTGGCTAGGTTTGTAGCGGATATATCGACGAAATACTAGACAT 612
Query 93095 GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCT 93154
|||||||| |||| ||||| || || || || || |||||||| || || |||||
Sbjct 613 GCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAAACCA 672
Query 93155 GGTAACAGT---CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
| ||||| || |||| |||| ||||||||| | ||||| |||| ||||||
Sbjct 673 G---ACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAAT 729
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271
|||||||| || || |||||||| || | |||||| | ||| | | | ||||
Sbjct 730 ATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAATCTGTACTACTTGAA 789
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
||||| ||| | ||| | |||||| ||| | ||| || | ||||||||| || |||
Sbjct 790 ATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATTA 849
Query 93332 AATAG--GTAATC-TCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388
|||| | || | | | |||| |||| |||||||| | | | || ||||||
Sbjct 850 AATAAAAGCAAACGTTGTTCGTTGCAATCA---ATGTATGTTTGCAAAAGCATGGAATAC 906
Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448
||||| ||||| ||||| || || |||||||| ||||| || ||||| | ||||| ||
Sbjct 907 ATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGTA 966
Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508
| ||| || ||| | ||||| ||| ||||||||||||| || || ||||| |||
Sbjct 967 ACCTGAACCTCTCGTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTTGCG 1026
Query 93509 GCaaaaaaaGC--CAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563
|||||||| || |||||||| || |||| ||| |||||| | || | ||||
Sbjct 1027 GCAAAAAATGCGAGAATATATG--ATAAAAAACGTTGCTCATCCGCGTTCAATTTGTTAT 1084
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
|||||| || |||| | |||||| || || || || ||||||||||| |||| |
Sbjct 1085 TCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCAAAACGAAGCTTGAG 1144
Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
|||||| ||||| | ||||| || | ||| | ||||||||| | ||||||||
Sbjct 1145 ATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAACACAACAAAACG 1199
>seq96803
Length=7468
Score = 250 bits (276), Expect = 3e-61
Identities = 603/902 (67%), Gaps = 18/902 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||| | ||||||| ||||| |||||| |||||| || ||||| | ||||||||
Sbjct 4155 CATTACATTAGATTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTC 4096
Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
||| || || | || | | || || | | | | |||| |||| | ||
Sbjct 4095 CAATGAAATTTGCTCCATAAAATCAAAAGGGTTTTCCGACTGA-AATATTTTTGGACAAT 4037
Query 92908 CAACTCGTACAATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966
| | | | | || | ||||||| || |||| |||||||| ||| | ||||
Sbjct 4036 CTAATTCCATGAGAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAAT 3977
Query 92967 TCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAAT-CTTTCTCGATTACAACG 93025
|||| || | | ||| || || ||||| || | |||||| ||| || |||| ||||
Sbjct 3976 TCATGCCAATTAAACGAACTGGCAGAGCATCCA-CTAGAAATTCTTGTTCAATTAAAACG 3918
Query 93026 GCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGT-- 93083
|||||| | ||||| | || | || | | | | | ||| | ||| || ||
Sbjct 3917 GCTTCTCGAATAATTTCGACTATTTTA-TCCTCGCTCGGTTTGTTGCGAATGTATCGTCG 3859
Query 93084 --ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | || || ||||| || |||||| ||||| || || || || | ||||||||
Sbjct 3858 AAATACTAGACATGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCT 3799
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
|| || ||||| |||| | ||| |||| || | ||||||||| || ||||| |||
Sbjct 3798 AAAAGTCAAACCACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACC 3739
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
| ||||||||| ||||| || || || ||||| || | |||||| |||||| || |
Sbjct 3738 ACTAAAAAATATCCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAA 3679
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
|||| | ||||| ||| ||||| | || |||||||| | ||| |||| |||||
Sbjct 3678 ATTATTAGAAATCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTC 3619
Query 93322 GATAGCGTTAAATAG--GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379
|| || ||||||| | | ||| || | | || || || || | | |
Sbjct 3618 AATTGCATTAAATAAAAGCATTCTTTCTTTTTTG--TCATCAATATACGTTTGCAAAAGT 3561
Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439
| ||||||||||| ||||| |||||||| || |||||||| ||||| || || || |
Sbjct 3560 AATGAATACATTTCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGT 3501
Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499
||||| || | ||| || ||| | ||||| || | ||||||||||| || | |||
Sbjct 3500 GCTTCTGTAACCTGAACCTCTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCA 3441
Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559
|| || |||||||| || | |||| | || ||| || ||||| || |
Sbjct 3440 TCACTAGCGGCAAAAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTTAAT 3381
Query 93560 TTAT---CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
|||| |||||| | |||| | | ||| ||||| || || |||||||| ||
Sbjct 3380 TTATTGATCCAATCAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAATGAA 3321
Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAA 93676
|||| |||||||||||||| | ||||| || | ||||| | |||||| | ||||||
Sbjct 3320 GCTTGAGCTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACAAAA 3261
Query 93677 CG 93678
||
Sbjct 3260 CG 3259
>seq67252
Length=1665
Score = 165 bits (182), Expect = 9e-36
Identities = 475/730 (65%), Gaps = 38/730 (5%)
Strand=Plus/Plus
Query 92925 TATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTA 92984
||||||||| ||||| ||||| ||| |||||||| |||||||||| |
Sbjct 621 TATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATTANNNN-- 678
Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTC---------TTTCA 93035
| ||||| || ||||| || || | ||| ||||| |||||
Sbjct 679 ------------CTGTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATAATTTTCA 726
Query 93036 AGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG 93095
|||||| ||||| | ||| ||| |||| || ||| || | | || || |
Sbjct 727 AGATTT-TATTATT-----ATTGGGTTTGTTTTTTAA---ATATTTAAATAATAGACATG 777
Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTG 93155
|||| || || | ||||| |||| ||| || | || || || ||||||||
Sbjct 778 CAAAATCACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCAT 837
Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215
||| | ||| |||| || | |||| | || | |||||| |||| |||||| || |
Sbjct 838 TTAAAATTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTC 897
Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275
|||| || || ||||||||||| | | || |||| | | || | ||||
Sbjct 898 CTTCAACAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATGTTTTTCATTTATCC 957
Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAAT 93334
||||||| ||||| ||||||||||| ||||| ||| || | || | ||| | || | |
Sbjct 958 ATTTTAATGCCCATTCGGCTTTTTTTTTAATGCAA-CTAATATTATGGATTGAATTTATT 1016
Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394
| | || | | | || |||| ||| ||||| | ||| | | ||||||||
Sbjct 1017 AAGGTATTTTGTTTATCTTTATCTTTAATGAGTGTATACAATAATAAACTGTACATTTCT 1076
Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454
|| || | ||| || | ||||||||| || || ||||| ||||| ||||| | || ||
Sbjct 1077 GAGTGTATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTCACTAATTTGA 1136
Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514
|| || ||||||| ||| | | |||||| |||||||| || || || |||||||
Sbjct 1137 ACATCACATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGCAAAA 1196
Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT 93574
||||| | |||| | ||| ||| | |||| || | || |||||| ||
Sbjct 1197 AAAGCGAGAATATAAGAAAAAAAGTGTCTTTCATTTTCACTTAGAAGTAACCAATC--AT 1254
Query 93575 AG--ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632
| ||||||| | ||| |||||||| |||||||| | | || |||||||| |
Sbjct 1255 TGTAATCTTTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTTTTTAT 1314
Query 93633 ACATATCCCA 93642
|||||| |||
Sbjct 1315 ACATATTCCA 1324
>seq95975
Length=5634
Score = 113 bits (124), Expect = 5e-20
Identities = 85/99 (86%), Gaps = 6/99 (6%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGG 126319
|||||||| ||||||||||||||||||||||||| |||||||||||| |||| | |
Sbjct 5291 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTTAAGATCTGGT--CCTCGTATGAG 5348
Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAATTATTATTG 126358
||||||||||||||||||| ||||||| || ||| |||
Sbjct 5349 GGCGTGGGTTCGAACCCCACTCCTGACACATCATTTTTG 5387
>seq77187
Length=4015
Score = 100 bits (110), Expect = 3e-16
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 92953 CATCAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTT 93012
||| || || ||||||||||| | ||| || || | || ||||| ||||| || |
Sbjct 3199 CATTAATTCGCAATTCATTCCAATGAGATTCACGGGCAACGCATCGGTTAAGAATTCCTG 3140
Query 93013 CTCGATTACAACGGCTTCTTTCAAGATTTCTATTACTCTA--CTATTTGGTGGTTTTTGT 93070
|| || | || || || || | |||| ||||| || | || | || || |
Sbjct 3139 TTCTATAAGCACCGCCTCCTTAATAATTTGGGCGACTCTTTCCTGATAGG-GCTTGTTCT 3081
Query 93071 ACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATC 93130
||| || ||| ||| || |||||||| ||| ||| | |||||||| || || |||
Sbjct 3080 -CGATGTACTTGAACAGCAAACACGCAAAATCGCAATGAAGCCCTTCGTCGCGCGAAATC 3022
Query 93131 AACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATAT 93186
| ||||||||||| |||||||| || | |||||||| || ||||||||||||||
Sbjct 3021 AGTTCATTGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATAT 2966
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 93587 AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATG 93646
|| || || ||||| || ||||| |||||||| || ||||| || ||||| | ||||||
Sbjct 1714 AGGTCCACCTCTTCCACTGTCCAGAACGATGCCTCAGCTTTCTTATACATCTGCCATATA 1655
Query 93647 TCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705
|| ||||||||||| ||||| | ||||| || || || ||||| || | ||| ||
Sbjct 1654 TCGTGATATTGAATAGGAAACACTACAAACCGCGACGGATTTTCTTTGAGAAGCGGTTC 1596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556153969625800
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