Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq95739 291 9e-74 seq96803 250 3e-61 seq67252 165 9e-36 seq95975 113 5e-20 seq77187 100 3e-16 >seq95739 Length=7868 Score = 291 bits (322), Expect = 9e-74 Identities = 610/895 (68%), Gaps = 28/895 (3%) Strand=Plus/Plus Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 |||||| || || |||||||||||||| || ||||| | ||||||||||| || || Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374 Query 92862 ATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 | || | | |||||| | || | |||| |||| | || | | | || Sbjct 375 CTCCATAAAATCAAATGGATTTTCCACGCAA-AATATTTTTGGACATTCCAATTCAATAA 433 Query 92920 TAATCT-ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAA 92978 || || ||| || |||||||| |||||||| ||| | ||||||||| || | | Sbjct 434 GAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAACAATTCATGCCGATTA 493 Query 92979 GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038 | || |||| || || | | || |||| || |||| |||||||||| | | Sbjct 494 AAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATAA 553 Query 93039 TTTCTATTACTCTACTATTTGGT-GGTTTTTGTACGACATA---ATTGTACATTAAGCAC 93094 |||| | | | | || || | | ||||| | || ||| | | | || || Sbjct 554 TTTCGCTAATTTT-CTCTTGGCTAGGTTTGTAGCGGATATATCGACGAAATACTAGACAT 612 Query 93095 GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCT 93154 |||||||| |||| ||||| || || || || || |||||||| || || ||||| Sbjct 613 GCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAAACCA 672 Query 93155 GGTAACAGT---CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 | ||||| || |||| |||| ||||||||| | ||||| |||| |||||| Sbjct 673 G---ACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACTGAAAAAT 729 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 |||||||| || || |||||||| || | |||||| | ||| | | | |||| Sbjct 730 ATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAATCTGTACTACTTGAA 789 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| ||| | ||| | |||||| ||| | ||| || | ||||||||| || ||| Sbjct 790 ATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCATTA 849 Query 93332 AATAG--GTAATC-TCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 |||| | || | | | |||| |||| |||||||| | | | || |||||| Sbjct 850 AATAAAAGCAAACGTTGTTCGTTGCAATCA---ATGTATGTTTGCAAAAGCATGGAATAC 906 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 ||||| ||||| ||||| || || |||||||| ||||| || ||||| | ||||| || Sbjct 907 ATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGTA 966 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | ||| || ||| | ||||| ||| ||||||||||||| || || ||||| ||| Sbjct 967 ACCTGAACCTCTCGTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTTGCG 1026 Query 93509 GCaaaaaaaGC--CAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 |||||||| || |||||||| || |||| ||| |||||| | || | |||| Sbjct 1027 GCAAAAAATGCGAGAATATATG--ATAAAAAACGTTGCTCATCCGCGTTCAATTTGTTAT 1084 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 |||||| || |||| | |||||| || || || || ||||||||||| |||| | Sbjct 1085 TCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCAAAACGAAGCTTGAG 1144 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 |||||| ||||| | ||||| || | ||| | ||||||||| | |||||||| Sbjct 1145 ATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAACACAACAAAACG 1199 >seq96803 Length=7468 Score = 250 bits (276), Expect = 3e-61 Identities = 603/902 (67%), Gaps = 18/902 (2%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||| | ||||||| ||||| |||||| |||||| || ||||| | |||||||| Sbjct 4155 CATTACATTAGATTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTC 4096 Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 ||| || || | || | | || || | | | | |||| |||| | || Sbjct 4095 CAATGAAATTTGCTCCATAAAATCAAAAGGGTTTTCCGACTGA-AATATTTTTGGACAAT 4037 Query 92908 CAACTCGTACAATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAAT 92966 | | | | | || | ||||||| || |||| |||||||| ||| | |||| Sbjct 4036 CTAATTCCATGAGAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAAT 3977 Query 92967 TCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAAT-CTTTCTCGATTACAACG 93025 |||| || | | ||| || || ||||| || | |||||| ||| || |||| |||| Sbjct 3976 TCATGCCAATTAAACGAACTGGCAGAGCATCCA-CTAGAAATTCTTGTTCAATTAAAACG 3918 Query 93026 GCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGT-- 93083 |||||| | ||||| | || | || | | | | | ||| | ||| || || Sbjct 3917 GCTTCTCGAATAATTTCGACTATTTTA-TCCTCGCTCGGTTTGTTGCGAATGTATCGTCG 3859 Query 93084 --ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | | || || ||||| || |||||| ||||| || || || || | |||||||| Sbjct 3858 AAATACTAGACATGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCT 3799 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 || || ||||| |||| | ||| |||| || | ||||||||| || ||||| ||| Sbjct 3798 AAAAGTCAAACCACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACC 3739 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 | ||||||||| ||||| || || || ||||| || | |||||| |||||| || | Sbjct 3738 ACTAAAAAATATCCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAA 3679 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 |||| | ||||| ||| ||||| | || |||||||| | ||| |||| ||||| Sbjct 3678 ATTATTAGAAATCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTC 3619 Query 93322 GATAGCGTTAAATAG--GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || || ||||||| | | ||| || | | || || || || | | | Sbjct 3618 AATTGCATTAAATAAAAGCATTCTTTCTTTTTTG--TCATCAATATACGTTTGCAAAAGT 3561 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 | ||||||||||| ||||| |||||||| || |||||||| ||||| || || || | Sbjct 3560 AATGAATACATTTCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGT 3501 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| || | ||| || ||| | ||||| || | ||||||||||| || | ||| Sbjct 3500 GCTTCTGTAACCTGAACCTCTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCA 3441 Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559 || || |||||||| || | |||| | || ||| || ||||| || | Sbjct 3440 TCACTAGCGGCAAAAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTTAAT 3381 Query 93560 TTAT---CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 |||| |||||| | |||| | | ||| ||||| || || |||||||| || Sbjct 3380 TTATTGATCCAATCAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAATGAA 3321 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAA 93676 |||| |||||||||||||| | ||||| || | ||||| | |||||| | |||||| Sbjct 3320 GCTTGAGCTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACAAAA 3261 Query 93677 CG 93678 || Sbjct 3260 CG 3259 >seq67252 Length=1665 Score = 165 bits (182), Expect = 9e-36 Identities = 475/730 (65%), Gaps = 38/730 (5%) Strand=Plus/Plus Query 92925 TATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTA 92984 ||||||||| ||||| ||||| ||| |||||||| |||||||||| | Sbjct 621 TATCAGCTATGAATTCAATGTATAATTTCATTAAATCACAGTTCATTCCTATTANNNN-- 678 Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTC---------TTTCA 93035 | ||||| || ||||| || || | ||| ||||| ||||| Sbjct 679 ------------CTGTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGTATAATTTTCA 726 Query 93036 AGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG 93095 |||||| ||||| | ||| ||| |||| || ||| || | | || || | Sbjct 727 AGATTT-TATTATT-----ATTGGGTTTGTTTTTTAA---ATATTTAAATAATAGACATG 777 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTG 93155 |||| || || | ||||| |||| ||| || | || || || |||||||| Sbjct 778 CAAAATCACAGTGAAGGCCTTCATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCAT 837 Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215 ||| | ||| |||| || | |||| | || | |||||| |||| |||||| || | Sbjct 838 TTAAAATTCCACGTTCTTTTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTC 897 Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275 |||| || || ||||||||||| | | || |||| | | || | |||| Sbjct 898 CTTCAACAGCAGCAAATGCCACGAGTCTCTCTCCAAAGCTAACATGTTTTTCATTTATCC 957 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAAT 93334 ||||||| ||||| ||||||||||| ||||| ||| || | || | ||| | || | | Sbjct 958 ATTTTAATGCCCATTCGGCTTTTTTTTTAATGCAA-CTAATATTATGGATTGAATTTATT 1016 Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394 | | || | | | || |||| ||| ||||| | ||| | | |||||||| Sbjct 1017 AAGGTATTTTGTTTATCTTTATCTTTAATGAGTGTATACAATAATAAACTGTACATTTCT 1076 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454 || || | ||| || | ||||||||| || || ||||| ||||| ||||| | || || Sbjct 1077 GAGTGTATATTTTCAACTGCAATTTGCAAACCATAGAAGCATCTTGCTTCACTAATTTGA 1136 Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 || || ||||||| ||| | | |||||| |||||||| || || || ||||||| Sbjct 1137 ACATCACATAAAAATCTTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGCAAAA 1196 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT 93574 ||||| | |||| | ||| ||| | |||| || | || |||||| || Sbjct 1197 AAAGCGAGAATATAAGAAAAAAAGTGTCTTTCATTTTCACTTAGAAGTAACCAATC--AT 1254 Query 93575 AG--ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632 | ||||||| | ||| |||||||| |||||||| | | || |||||||| | Sbjct 1255 TGTAATCTTTTCCCAAATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTTTTTAT 1314 Query 93633 ACATATCCCA 93642 |||||| ||| Sbjct 1315 ACATATTCCA 1324 >seq95975 Length=5634 Score = 113 bits (124), Expect = 5e-20 Identities = 85/99 (86%), Gaps = 6/99 (6%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGG 126319 |||||||| ||||||||||||||||||||||||| |||||||||||| |||| | | Sbjct 5291 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTTAAGATCTGGT--CCTCGTATGAG 5348 Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAATTATTATTG 126358 ||||||||||||||||||| ||||||| || ||| ||| Sbjct 5349 GGCGTGGGTTCGAACCCCACTCCTGACACATCATTTTTG 5387 >seq77187 Length=4015 Score = 100 bits (110), Expect = 3e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 92953 CATCAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTT 93012 ||| || || ||||||||||| | ||| || || | || ||||| ||||| || | Sbjct 3199 CATTAATTCGCAATTCATTCCAATGAGATTCACGGGCAACGCATCGGTTAAGAATTCCTG 3140 Query 93013 CTCGATTACAACGGCTTCTTTCAAGATTTCTATTACTCTA--CTATTTGGTGGTTTTTGT 93070 || || | || || || || | |||| ||||| || | || | || || | Sbjct 3139 TTCTATAAGCACCGCCTCCTTAATAATTTGGGCGACTCTTTCCTGATAGG-GCTTGTTCT 3081 Query 93071 ACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATC 93130 ||| || ||| ||| || |||||||| ||| ||| | |||||||| || || ||| Sbjct 3080 -CGATGTACTTGAACAGCAAACACGCAAAATCGCAATGAAGCCCTTCGTCGCGCGAAATC 3022 Query 93131 AACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATAT 93186 | ||||||||||| |||||||| || | |||||||| || |||||||||||||| Sbjct 3021 AGTTCATTGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATAT 2966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 93587 AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATG 93646 || || || ||||| || ||||| |||||||| || ||||| || ||||| | |||||| Sbjct 1714 AGGTCCACCTCTTCCACTGTCCAGAACGATGCCTCAGCTTTCTTATACATCTGCCATATA 1655 Query 93647 TCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 || ||||||||||| ||||| | ||||| || || || ||||| || | ||| || Sbjct 1654 TCGTGATATTGAATAGGAAACACTACAAACCGCGACGGATTTTCTTTGAGAAGCGGTTC 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556153969625800