Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq94527 100 6e-16
seq97871 96.9 7e-15
seq60584 89.7 1e-12
>seq94527
Length=5139
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||
Sbjct 602 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 661
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 662 CCCCACGTTGGGC 674
>seq97871
Length=2263
Score = 96.9 bits (106), Expect = 7e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||| || |||||||||||||||||| | ||||||||||||| | |||||||||||||||
Sbjct 1570 AGCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1629
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1630 CCCCACGTTGGGC 1642
>seq60584
Length=2627
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2089 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2148
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2149 CCCACGTTGGGC 2160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1026499537749345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |