Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq100917 170 4e-37 seq44500 120 6e-22 seq39385 87.8 3e-12 seq94527 86.0 1e-11 >seq100917 Length=15418 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||| || || || |||||||| || ||||| |||||| ||||| || Sbjct 7777 AGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTTAGTGTTCTT 7718 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || ||||||||||| || || |||||||| | | || || || || |||||||| ||| Sbjct 7717 CCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCC 7658 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| |||||||| ||||| || |||||||||||| | | || ||||| | ||| Sbjct 7657 TTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAGCGTG 7598 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || || ||||| ||||| ||||||||||||||| || Sbjct 7597 ATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTG 7556 >seq44500 Length=545 Score = 120 bits (132), Expect = 6e-22 Identities = 163/229 (71%), Gaps = 9/229 (4%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| ||||||| ||||| |||| || || ||| | || || | ||||| ||||| Sbjct 229 TCCGCCGCGAACACGCAAAACCAGTTGAAGTGTGCAATCCTTCTCAATGTTGTAATCATT 170 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 |||||| || |||||||| | || | ||||| || || ||| | || || ||||| || Sbjct 169 GAGTGTTCTTCCATCTTCCAGTTGTCTGCCGGCAAAGATCAGTATCTGCTGATCGGGAGG 110 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||||||| || | |||||||| |||||| |||||||| || || ||| || Sbjct 109 AATGCCTTCCTTTTCCTCAATCTTTGTCTTGACATTCTCGATGGAATCGCTTGGTTCCAC 50 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| ||||| | || | |||| ||||||||||||| Sbjct 49 TTCCA---------GCTTTCCAATCAGATTTTTGATGAATATCTGCATT 10 >seq39385 Length=5141 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || || ||||||||| |||||| || |||||||| | || || || ||||| || Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 |||| || || ||||| ||||||||||||||||| ||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAAT 106 >seq94527 Length=5139 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 603 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 662 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 663 CCCACGTTGGGC 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920452573167400