Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq94648 100 2e-16 seq39385 82.4 6e-11 >seq94648 Length=7301 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 |||||| || | || || ||||| || | ||| |||||||| | | || ||||| Sbjct 5083 AACTAAGTGAAGTGTCGACTCTTTCTGTACGTTATAATCGCTTAAAACTCGTTCGTCTTC 5142 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||||| || | | || || | || ||||| |||||||| ||||| ||||| Sbjct 5143 CAGTTGTTTGCCGCCAAATATCAGTCTTTGCTGGTCAACAGGAATGCTCTCTTTATCGGC 5202 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||||| |||| | ||| ||| |||| || | ||| ||||| | || | ||||| Sbjct 5203 AATCTTTGACTTTACCAGTTGAACACTGTCTGTCGGTTCCACGTCTAACGTAATAGTTTT 5262 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| ||| || || ||||| |||||||| Sbjct 5263 GCCATTCAATGTCTTAACAAAGATCTGCAT 5292 >seq39385 Length=5141 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || ||||| || |||||||| | || | |||||| |||||||| |||||| |||| Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 || ||||| || || |||||||||||||| ||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTC 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419614450200540