Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq100917 102 6e-17 seq40065 82.4 6e-11 >seq100917 Length=15418 Score = 102 bits (112), Expect = 6e-17 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||||||||||||||| || ||| ||||| ||||||||||| || Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATC-GCT 7728 Query 33961 AATTGTCGCTC-GTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | ||| || ||| || || || ||||| || ||||||| ||||||||||| || Sbjct 7727 TAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGG 7668 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | || ||| |||||| ||| || ||| | ||| | | || | | || Sbjct 7667 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCA-CATTCTCGATGGTGTCCGACGGCTCCA 7609 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 ||||| ||| ||||| || || || ||||| ||||| || || |||||||| Sbjct 7608 CTTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557 >seq40065 Length=761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC--T 33957 ||| || || || || | |||| |||||| ||| || |||| | | | ||||| | Sbjct 583 ACCGCCACTGAGGCGAACAACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAATCACT 524 Query 33958 GCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 | || | |||||||| |||| ||| |||||||||||||| || | || || || || Sbjct 523 GATAACT--CGCTCGTCTTCCAGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTCAACA 466 Query 34018 GGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACT--CACACTATCAGTAGATT 34075 |||| | |||||| || |||| || ||||| ||| ||| | || || | || Sbjct 465 GGCAAACCCTCTTTATCGGTAATCTTCGACTTAA--CCACTTGAACAGTGTCTGTCGGTT 408 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTT 34129 | || | ||| |||||||| || | ||||| ||||| || || ||||||| Sbjct 407 CCACGTCTAACGTAATTGTTTTGCCATTCAGTGTCTTCACGAATATATGCATTT 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396571003639090