Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq100917 131 4e-25 seq87608 104 6e-17 >seq100917 Length=15418 Score = 131 bits (144), Expect = 4e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || ||||| || || || || ||| || || | ||||||| Sbjct 7771 AGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTTAGTGTTCTTCCGTCT 7712 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 ||||| ||||| || ||||| |||| ||||| ||| | || || || || || ||| Sbjct 7711 TCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCC 7652 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || || ||||| ||||| || || || | || || || |||||||||||||| ||| Sbjct 7651 TGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAGCGTGATTGTC 7592 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || || || ||||| ||||||||||||||| ||| Sbjct 7591 TTACCAGTGAGTGTCTTCACGAATATCTGCATTTTGT 7555 >seq87608 Length=6889 Score = 104 bits (114), Expect = 6e-17 Identities = 327/497 (66%), Gaps = 10/497 (2%) Strand=Plus/Minus Query 325114 ATTATCTACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGAT 325173 ||| ||||||| ||| | || || ||| |||| || || || ||| || || ||||| Sbjct 3161 ATTTTCTACGACTTCTCTTGGATTATAATTGGGTATTTTAGTGCTCCAACCCGTGCCGAT 3102 Query 325174 ACCACTCGAT-CCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTGGTTCGA 325232 ||| ||| ||||||||||| | |||||| | ||||||||| | || || |||| Sbjct 3101 ACC-CTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAAATTCAGGCTCGA 3043 Query 325233 TCTTATCGCCGTCGTCGTACATATATTTCAGAAGATTGTCGTCC-GTATCGACGAAAACC 325291 | || |||||||| | ||| || ||||| ||| ||| || ||| ||||| Sbjct 3042 TTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTGGCGA-GAAAATT 2984 Query 325292 TGTCGAGTCTGAGGGTTCAGTTTCatatatatatatCGTGCACTCGCGTGATCCTTACCA 325351 | ||| | | ||| | || | || | ||||| || | |||||| || || || Sbjct 2983 TTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCGCAGCGTCTTTTCCG 2924 Query 325352 CCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCG 325411 ||||| | || || || ||||| || ||| | |||| || |||||||| ||| Sbjct 2923 CCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAATATTATTGCTGCCG 2864 Query 325412 ACATAATCCTGTGCAAGGTTCACGATGGT--CCCTTGCAGAGATGCTTCGCCATGGTGAT 325469 ||||| | || || | || | || || | || ||||| ||||| || || || | Sbjct 2863 ACATAGTTTTGGGCTAAATTGATAATAGTTGACATT--AGAGACGCTTCTCCGTGATGGT 2806 Query 325470 AGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAAT 325529 | || |||||| | || |||| | ||||| || ||||| || | | | Sbjct 2805 ATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCTCTCTTTTATCGT 2746 Query 325530 TGCGCTTGAAAGC-TGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACC 325588 | ||||| ||||| | ||| |||||||| | || |||||| |||||||| | | Sbjct 2745 TACGCTT-AAAGCAAGTATACATCACTTTTCTCTGTCCAGGTTTCAAACCATCCATCAGT 2687 Query 325589 GACGGAATGCTTCGTTC 325605 || |||||| ||||| Sbjct 2686 GATGGAATGGACCGTTC 2670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178119616172510