Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq87608 120 7e-22 seq87583 120 7e-22 >seq87608 Length=6889 Score = 120 bits (132), Expect = 7e-22 Identities = 330/496 (67%), Gaps = 10/496 (2%) Strand=Plus/Minus Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295 || ||||||| ||| ||||||| ||| | || || ||||| |||||| || ||||| Sbjct 3160 TTTTCTACGACTTCTCTTGGATTATAATTGGGTATTTTAGTGCTCCAACCCGTGCCGATA 3101 Query 297296 CCACTCGAA-CCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGAT 297354 || ||| ||||||||||||| |||||| | ||||||||| | || || ||||| Sbjct 3100 CC-CTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAAATTCAGGCTCGAT 3042 Query 297355 CTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCC-GTATCGACGAAAACCT 297413 || | || || || ||||| || ||||| || ||| || ||| ||||| | Sbjct 3041 TTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTGGCGA-GAAAATTT 2983 Query 297414 GTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCAC 297473 ||| | | ||| | || |||| || ||||| || | |||||| || || || | Sbjct 2982 TTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCGCAGCGTCTTTTCCGC 2923 Query 297474 CCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGA 297533 |||| | || || || ||||| || ||| | |||| || |||||||| |||| Sbjct 2922 CCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAATATTATTGCTGCCGA 2863 Query 297534 CATAATCCTGTGCAAGGTTCACGATGGT--CCCTTGCAGAGATGCTTCGCCATGGTGATA 297591 |||| | || || | || | || || | || ||||| ||||| || || || || Sbjct 2862 CATAGTTTTGGGCTAAATTGATAATAGTTGACATT--AGAGACGCTTCTCCGTGATGGTA 2805 Query 297592 GGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATT 297651 || |||||| | || |||| | ||||| || ||||| || | | || Sbjct 2804 TGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCTCTCTTTTATCGTT 2745 Query 297652 GCGCTTGAAAGC-TGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCG 297710 ||||| ||||| | ||| |||||||| | || |||||| |||||||| | | | Sbjct 2744 ACGCTT-AAAGCAAGTATACATCACTTTTCTCTGTCCAGGTTTCAAACCATCCATCAGTG 2686 Query 297711 ACGGAATGCTTCGTTC 297726 | |||||| ||||| Sbjct 2685 ATGGAATGGACCGTTC 2670 >seq87583 Length=5369 Score = 120 bits (132), Expect = 7e-22 Identities = 257/379 (68%), Gaps = 4/379 (1%) Strand=Plus/Minus Query 297176 AATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGCAATCAATCGCTTCACG 297235 ||||||| | |||||||||||||| | | || || ||| ||||| ||| ||| Sbjct 2684 AATCCTCTAAACCACGGTTTCATTGGTAGTATTTCGTCGCCATGAATCATTCGTCTCAAA 2625 Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295 || | ||||| ||||| ||||| || | || || ||||| |||||| || ||||| Sbjct 2624 TTATTGACGATATCTTTAGGATTATAGTTCGGTATTTTAGTGCTCCAACCCGTTCCGATA 2565 Query 297296 CCACTCGAACCATTCACCAGAATGCTCGG-AATAACAGGCACATAATACTCTGGTTCGAT 297354 ||| | |||||||| | ||| | || |||| | || ||||||| || |||||||| Sbjct 2564 CCATCGGCGCCATTCACTAAAATCATTGGTAATATC-GGAGCATAATATTCCGGTTCGAT 2506 Query 297355 CTTGTCACCGTCATCATACAGATATTTCAG-AAGATTATCGTCCGTATCGACGAAAACCT 297413 ||| | | |||||| | || | || || ||| | ||||| || || | || Sbjct 2505 CTTTTGATTGTCATCGAAAAGGAAGTTAAGTAAGGGT-TCGTCACACGCGGGAAATATCT 2447 Query 297414 GTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCAC 297473 || | | |||| | || ||||||| || || || | ||||||| ||| || || | Sbjct 2446 TTCTCGCCAAAGGGCTTAGCATTGTGAAGATGTAACGCGGACTCGCGGCATCTTTTCCTC 2387 Query 297474 CCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGA 297533 |||| | | | ||||| || || ||| | |||| |||||||||||||| | Sbjct 2386 CCTGAAGACGTGTGCCGAATTGACCTCTCGGTTGAAGTAAGTTTATGTTATTGCTTCCAA 2327 Query 297534 CATAATCCTGTGCAAGGTT 297552 ||||||| || || | ||| Sbjct 2326 CATAATCTTGAGCTAAGTT 2308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101445103145750