Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq87608 120 7e-22
seq87583 120 7e-22
>seq87608
Length=6889
Score = 120 bits (132), Expect = 7e-22
Identities = 330/496 (67%), Gaps = 10/496 (2%)
Strand=Plus/Minus
Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295
|| ||||||| ||| ||||||| ||| | || || ||||| |||||| || |||||
Sbjct 3160 TTTTCTACGACTTCTCTTGGATTATAATTGGGTATTTTAGTGCTCCAACCCGTGCCGATA 3101
Query 297296 CCACTCGAA-CCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGAT 297354
|| ||| ||||||||||||| |||||| | ||||||||| | || || |||||
Sbjct 3100 CC-CTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAAATTCAGGCTCGAT 3042
Query 297355 CTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCC-GTATCGACGAAAACCT 297413
|| | || || || ||||| || ||||| || ||| || ||| ||||| |
Sbjct 3041 TTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTGGCGA-GAAAATTT 2983
Query 297414 GTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCAC 297473
||| | | ||| | || |||| || ||||| || | |||||| || || || |
Sbjct 2982 TTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCGCAGCGTCTTTTCCGC 2923
Query 297474 CCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGA 297533
|||| | || || || ||||| || ||| | |||| || |||||||| ||||
Sbjct 2922 CCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAATATTATTGCTGCCGA 2863
Query 297534 CATAATCCTGTGCAAGGTTCACGATGGT--CCCTTGCAGAGATGCTTCGCCATGGTGATA 297591
|||| | || || | || | || || | || ||||| ||||| || || || ||
Sbjct 2862 CATAGTTTTGGGCTAAATTGATAATAGTTGACATT--AGAGACGCTTCTCCGTGATGGTA 2805
Query 297592 GGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATT 297651
|| |||||| | || |||| | ||||| || ||||| || | | ||
Sbjct 2804 TGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCTCTCTTTTATCGTT 2745
Query 297652 GCGCTTGAAAGC-TGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCG 297710
||||| ||||| | ||| |||||||| | || |||||| |||||||| | | |
Sbjct 2744 ACGCTT-AAAGCAAGTATACATCACTTTTCTCTGTCCAGGTTTCAAACCATCCATCAGTG 2686
Query 297711 ACGGAATGCTTCGTTC 297726
| |||||| |||||
Sbjct 2685 ATGGAATGGACCGTTC 2670
>seq87583
Length=5369
Score = 120 bits (132), Expect = 7e-22
Identities = 257/379 (68%), Gaps = 4/379 (1%)
Strand=Plus/Minus
Query 297176 AATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCAGCAATCAATCGCTTCACG 297235
||||||| | |||||||||||||| | | || || ||| ||||| ||| |||
Sbjct 2684 AATCCTCTAAACCACGGTTTCATTGGTAGTATTTCGTCGCCATGAATCATTCGTCTCAAA 2625
Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295
|| | ||||| ||||| ||||| || | || || ||||| |||||| || |||||
Sbjct 2624 TTATTGACGATATCTTTAGGATTATAGTTCGGTATTTTAGTGCTCCAACCCGTTCCGATA 2565
Query 297296 CCACTCGAACCATTCACCAGAATGCTCGG-AATAACAGGCACATAATACTCTGGTTCGAT 297354
||| | |||||||| | ||| | || |||| | || ||||||| || ||||||||
Sbjct 2564 CCATCGGCGCCATTCACTAAAATCATTGGTAATATC-GGAGCATAATATTCCGGTTCGAT 2506
Query 297355 CTTGTCACCGTCATCATACAGATATTTCAG-AAGATTATCGTCCGTATCGACGAAAACCT 297413
||| | | |||||| | || | || || ||| | ||||| || || | ||
Sbjct 2505 CTTTTGATTGTCATCGAAAAGGAAGTTAAGTAAGGGT-TCGTCACACGCGGGAAATATCT 2447
Query 297414 GTCGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCAC 297473
|| | | |||| | || ||||||| || || || | ||||||| ||| || || |
Sbjct 2446 TTCTCGCCAAAGGGCTTAGCATTGTGAAGATGTAACGCGGACTCGCGGCATCTTTTCCTC 2387
Query 297474 CCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGA 297533
|||| | | | ||||| || || ||| | |||| |||||||||||||| |
Sbjct 2386 CCTGAAGACGTGTGCCGAATTGACCTCTCGGTTGAAGTAAGTTTATGTTATTGCTTCCAA 2327
Query 297534 CATAATCCTGTGCAAGGTT 297552
||||||| || || | |||
Sbjct 2326 CATAATCTTGAGCTAAGTT 2308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1101445103145750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |