Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq100917 98.7 1e-15 seq44606 89.7 5e-13 >seq100917 Length=15418 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||||| ||||| ||||| || ||||||||||| | || | ||||| Sbjct 7771 AGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTTAGTGTTCTTCCGTCT 7712 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| ||||| || | || | ||||||||| || |||||||| || || || || Sbjct 7711 TCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCC 7652 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTAT-CACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| ||| | || | | |||| |||||||| | || | || Sbjct 7651 TGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGC-TCCACTTCGAGCGTGATTGT 7593 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| || || | || || ||||| || |||||||| Sbjct 7592 CTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557 >seq44606 Length=634 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 115367 CACGGTTTTCATGTTCACGAATTCGGCGACACTAGCAACGGCTGCACGTCCGCCGGCGAG 115426 ||||| |||||||| ||||||||||| ||| ||| | |||| | || |||||| Sbjct 250 CACGGCTTTCATGTGCACGAATTCGGTGACCTCAGCGATAGCTGTGCATCGACCGGCGCT 191 Query 115427 CATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCACGTCGGT 115486 || || ||||||| |||| ||||||||||||| || | || ||| ||| || || || Sbjct 190 CACTTTAACCCGTATAACAAAGATCACGGCGCGCCAACCGATACCGACCGACATGTGGGC 131 Query 115487 GATCTGGGCAAC 115498 ||| |||| ||| Sbjct 130 GATTTGGGTAAC 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499010594609800