Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq94721 96.9 3e-15 >seq94721 Length=6748 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 153816 TCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCG 153875 |||| ||| || | |||||||||| |||||||| ||||| | || || || || Sbjct 2428 TCGC-CTCATAACTCTCGTACAGTTTGTCAAACTCTTCGCCCCAACAATCATGAAGTCCC 2486 Query 153876 GGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAAC 153935 ||||||| ||||||||||| |||||||| | |||||| || | ||||| ||||| ||| Sbjct 2487 GGACACTCGTGCGGACACATTAGCGACCAAACATCGTCAGCCTCTACGCGACGCATAAAC 2546 Query 153936 AGATCCGGCACCCAGAGCGCGTACATGAGGTCGC--GCGCCTTGCAA-TCCTCCGCGCCC 153992 | |||||| | ||| || | || | ||| || | |||| |||| || |||| || Sbjct 2547 AAATCCGGAATCCAAAGTCCATAGAAGAGATCTCTGGCGC---GCAACTCTTCCGAACCG 2603 Query 153993 ATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTC 154042 |||| ||| |||| || | |||| || |||||||| || || Sbjct 2604 GTGTTCTTTTTAAGATCAAGAAATTCGAAGATATCTGCGTGCCATGGCTC 2653 Score = 89.7 bits (98), Expect = 5e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 154374 TACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGC 154433 || ||||| || || || || || ||||||||||| |||| ||| || | ||| | | Sbjct 3106 TAGGTTTCAATCGCAGAATCAATGTCCTCGCCGTGAATACCGACCGCCACTCTCATCAAC 3165 Query 154434 ATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCAT-TTTCGAG 154492 || |||||||| ||||| ||| | | | ||||||||| ||||| | || ||| || Sbjct 3166 ATATGCTGCGGTCGTTCAACGATTTTGCCATTAATCTTCAACAGATA-CGATCGTTCCAG 3224 Query 154493 GGTTTTGTAACCGAAATACTTGTATTCAAAATC 154525 ||||||| | |||||||| |||||| || ||| Sbjct 3225 GGTTTTGAACCCGAAATAATTGTATCGAAGATC 3257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495632487932400