Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq52100 98.7 4e-16 >seq52100 Length=779 Score = 98.7 bits (108), Expect = 4e-16 Identities = 357/548 (65%), Gaps = 12/548 (2%) Strand=Plus/Plus Query 16627 CATCCGCAGACTCATCTTGCCTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGG 16686 ||||||||| || || || |||||| ||| | ||||||||||| ||||| || || Sbjct 2 CATCCGCAGCGGCACCTGGCTGGCTTCAAGGGTATCCTGCAAGCGGACGCGTATGCTGGC 61 Query 16687 TTCAACGAGCTGT--ATCGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCC 16744 || ||||| || | |||| |||| | ||| || || || ||| ||| || || Sbjct 62 TTTAACGATCTCTTCATCG--ATGGCGCGATTCGCGAGGCGGCATGCATGGCCCACGCGA 119 Query 16745 GCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTCAGCACTGACGGAAGAAGCCCTGG 16804 | | || | |||| | || || || | || || | |||| || | || || | Sbjct 120 GGAGGAAACTGTACGACATTCATGTACGTACGCCATCGGAGACGACGCAAAAGGCGCTCG 179 Query 16805 AGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGCAGC 16864 | ||||| | | |||||| ||| ||||| | ||| | || | ||| | | ||| Sbjct 180 ACACGATCGCTGAACTGTACGGCATCGAGGCCGGTATTCGTGGCAAGCCAGTCGCCGAGC 239 Query 16865 GGCTTGCT-GAACGTCAGCGAAAAACGAAACCGTTGTTGAAATCCCTGGAAAGCTGGTTG 16923 || |||| | || ||| ||| | |||||| || | | | ||| |||| | Sbjct 240 GG-TTGCGCGTGCGGCAGGAGAAATCCAAACCGCTGCTCGACACTTACGAAGCCTGGCTC 298 Query 16924 C--GTGAAAAGATGAAGACCCTGTCGCGACACTCAGAGTTGGCGAAGGCGTTCGCGTACG 16981 | ||| || ||| || |||||| | || || ||| |||||| || ||| Sbjct 299 AAGGCGAAGCGA-GAA-ACGCTGTCGGTGAAATCCGATACGGCCAAGGCGATCAACTACT 356 Query 16982 CACTTAACCAGTGGCCGGCACTGACGTACTA-TGCGAACGATGGCTGGGTGGAAATCGAC 17040 | || ||||||||| | || |||| | || ||||| ||||| || || ||||| Sbjct 357 CGCTCAACCAGTGGGCTGCGCTGAGGCTGTACTGCGAT-GATGGTGCAGTCGAGATCGAT 415 Query 17041 AACAACATCGCTGAAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTC 17100 |||||| ||||||||||||| ||||| || || ||||| || || || || ||||| Sbjct 416 AACAACCTCGCTGAAAATGCGCTGCGTTGCGTGAGCCTGGGCCGGAAGAATTTTATGTTC 475 Query 17101 TTCGGCTCTGATCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGC 17160 || || || || || ||||||| ||| | ||||| || ||||| | ||| Sbjct 476 GCAGGTTCCGACAGCGGGGGCGAGCGGGCAGCCGCAATGTACTCGCTCATCGGAAGTTGC 535 Query 17161 AAACTGAA 17168 ||||| || Sbjct 536 AAACTCAA 543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198509139380610