Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq100917 127 2e-24 seq39385 87.8 2e-12 seq95989 84.2 2e-11 >seq100917 Length=15418 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||||| ||| | || |||||||| || || |||||||||| | || | Sbjct 7774 CGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTTAGTGTTCTTCCG 7715 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || |||| |||||| |||||| | ||||| ||||||||||| ||||| |||||||||||| Sbjct 7714 TCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCCCTCCTTG 7655 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| || ||| ||| | | |||| |||||||| ||| ||||||| || | Sbjct 7654 TCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAGCGTGATT 7595 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 7594 GTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 >seq39385 Length=5141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || |||||||| ||||||| | || | ||| || || ||||| |||||| ||||| Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 | |||||||||||||||||| ||||| ||||||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTCC 111 >seq95989 Length=12046 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| |||||||| || || ||||| | | ||||| ||| ||| Sbjct 11946 ACCAAATGAAGAGTAGATTCTTTTTGGATGTTATAATCACTTAAAGTGCGTCCATCCTCT 12005 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| || ||| | |||||||| |||||||||||||| Sbjct 12006 AGTTGTTTGCCTGCGAATATCAATCGTTGCTGATCGGGAGG 12046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474897240890800