Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq94648 86.0 4e-12 >seq94648 Length=7301 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 39490 TCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCG 39549 ||||| |||| | ||| || || || || | || ||||| |||| ||||||||| Sbjct 5063 TCGCCACCTCTGAGACGAAGAACTAAGTGAAGTGTCGACTCTTTCTGTACGTTATAATCG 5122 Query 39550 GCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAG 39609 ||||| ||||| || |||| |||||| |||||||| || | | ||||| || Sbjct 5123 CTTAAAACTCGTTCGTCTTCCAGTTGTTTGCCGCCAAATATCAGTCTTTGCTGGTCAACA 5182 Query 39610 GGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATC-GTCGCTACTGTGTCTGCGCTTTC 39668 || | || ||||| ||| || ||| || | | || | || |||||| ||| Sbjct 5183 GGAATGCTCTCTTTATCGGCAATCTTTGACTTTACCAGTTGA-ACACTGTCTGTCGGTTC 5241 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||| || ||||| ||||| || | || || || || ||||||||||| Sbjct 5242 CACGTCTAACGTAATAGTTTTGCCATTCAATGTCTTAACAAAGATCTGCAT 5292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346939702438985