Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq100917 123 2e-23 seq77187 116 4e-21 >seq100917 Length=15418 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| |||||||| || || ||||| || || || ||||| |||| || ||| | Sbjct 7557 AAAATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCG 7616 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || || | ||||| ||||| ||||| | || Sbjct 7617 TCGGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGAT 7676 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || |||||| | || | ||| ||||||||| | || |||| | || || | ||| ||| Sbjct 7677 CAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTAC 7736 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || || |||| || ||| |||||||||| ||||||||||| Sbjct 7737 AACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGGC 7787 >seq77187 Length=4015 Score = 116 bits (128), Expect = 4e-21 Identities = 181/265 (68%), Gaps = 7/265 (3%) Strand=Plus/Minus Query 132882 CTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT-CGTCCCTGGAAATGAGTTCGT 132940 |||||||| ||| || ||||| |||||||| ||||||| |||| | ||||| ||||| | Sbjct 3073 CTTGAACAGCAAACACGCAAAATCGCAATG-AAGCCCTTCGTCGCGCGAAATCAGTTCAT 3015 Query 132941 TGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG-----C 132995 ||||||| || || || ||||| || || || |||||||||||||||||||| | Sbjct 3014 TGCTGAACGTTAAACCAGGCATAAGTCCTCGCTTTTTGAGCCAAAATATGGCTGNNNNNN 2955 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 ||||||||||||| || || | ||| ||||| || Sbjct 2954 NNNNNNNNNNNNNNNNNNNNNNNNNNCGACGGCCGCGAATGCGACGATGCGTTCGCCAAA 2895 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 || |||| | ||||| | |||| || |||||||| |||||| | ||| ||||| Sbjct 2894 CGACGCTTTCTCGCTGGAGGTCCACGCCATCGCCCATTTGGCCTTCTTTTTCACGCAAAC 2835 Query 133116 CATCGTTTCGATGGCGTTCAACAAA 133140 | |||| | |||||| || ||| Sbjct 2834 AAGGTTTTCAACGGCGTTAAATAAA 2810 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 |||| |||||| || || ||||| || || |||||||| || || || ||||| ||| Sbjct 1825 ACCAAATTTTCATTAACAATGCCATCACTTGCGGCGAAGAACGCGAGAACGTGTGATATG 1766 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || || |||||| | ||| || |||||| | | ||| | ||||||||| Sbjct 1765 AAGTGACGCTCGCCTTTACTCAGTGTCTTCCAGTCACTCAAATCCCTTCCGAGGTCCACC 1706 Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT 133458 || || || ||||| ||||| ||||| ||||| || ||||| ||| || || |||| Sbjct 1705 TCTTCCACTGTCCAGAACGATGCCTCAGCTTTCTTATACATCTGCCATATATCGTGATAT 1646 Query 133459 TGTATGGGAAAAATCACAAACCG 133481 || || ||||| | |||||||| Sbjct 1645 TGAATAGGAAACACTACAAACCG 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499537924412800