Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq95288 156 3e-32 seq32350 141 7e-28 seq2686 111 1e-18 seq95264 109 4e-18 seq93545 102 6e-16 seq11063 102 6e-16 seq34509 100 2e-15 >seq95288 Length=1419 Score = 156 bits (172), Expect = 3e-32 Identities = 343/505 (68%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| || || ||||| | ||| || || ||||| ||||| || | || | | || ||| Sbjct 504 ACCGCCAGCGGTTTCGATACCGAGTGATAGAGGCGTGACGTCCAATAACAGCAGATCTTG 445 Query 517564 AAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | || ||| | | || | ||| |||||| |||||||||| || || || || |||| Sbjct 444 TACTTGTTC-TGATTTGTCGCCATTAAGAATGGCTGCTTGAACTGCGGCGCCGTAAGCAA 386 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 ||||||| || ||||||| ||| || | || ||||||||||| |||| | ||| | Sbjct 385 CAGCTTCGTCCGGATTAATGCTTTTGTTCAATTCCTTACCATTGAAGAAATCTTGAAGTA 326 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 ||| | | ||| || ||||||| || || || ||||| || || || || ||||| | Sbjct 325 GTTTTTGAATCTTTGGTATACGAGTAGAGCCACCGACTAACACGATGTCGTGAACCTGAG 266 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 || || ||||||| || || | || || ||||| || || | || |||| Sbjct 265 CCTTGTCTAGTTTTGCGTCGCGCAACGCCTTCTCCACGGGATCGAGTGTTGATCGGAACA 206 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 517861 || | | | ||| |||||| |||||||| | || | || || ||||| ||| Sbjct 205 GATCAGCATTCAATTCCTCGAATCGCGCTCTAGTGATGGT-TGAGTAGAAGTCAATGCCT 147 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 ||||| || ||||| | ||| || | | |||||||| || || |||| || || || Sbjct 146 TCGAATAATGAATCGATTTCGATGCTGGCCTGAGTCGATGATGAAAGTGTTCGCTTCGCT 87 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA-TTGATTCAA-ATCTGTTT 517979 | || |||| || || | | || || ||| | || | ||||| || |||| ||| Sbjct 86 CTCTCGCATGAGGTTCTCAAACGACGCAACGCTCT--CTTATTTGATGAAAGATCTTTTT 29 Query 517980 TATATTTTCTCTTGAAATCTTCAAC 518004 ||| ||| | ||||| |||| ||| Sbjct 28 TATGTTTGCGTTTGAATTCTTGAAC 4 Score = 102 bits (112), Expect = 6e-16 Identities = 233/348 (67%), Gaps = 2/348 (1%) Strand=Plus/Minus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 || ||| ||| |||||| || || | |||| || |||||| || |||||| ||| Sbjct 902 GCCTCTTTAACCATTCTTTCGATATCTTCTTTGCTGAGTCTTCCCTTATCATTAGTGATA 843 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 || || || || ||| || || ||||| || |||||||| |||||||| || Sbjct 842 GTGATTTTGTTCTCTTTACCCGTACTCTTGTCAGCTGCGGTCACATTGAGAATACCGTTA 783 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 || || | ||| || ||||| ||||| || || || || | | ||||| || || || Sbjct 782 GCGTCGATATCGAACGTGACCTCAATCTGCGGTACACCGCGTGGCGCAGGGGGTATACCA 723 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 517402 ||| | || |||| || ||| || ||||| || | ||| || || ||| | Sbjct 722 GTCAACTCGAACTTTCCGAGCAAATTGTTGTCTTTGGTCATCGCTCGCTCTCCTTCGTAC 663 Query 517403 ATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTA 517462 | ||| || |||| | | |||||| || ||||| |||||| |||| ||| Sbjct 662 ACTTGAATCAGAACTCCCGGTTGATTGTCGCTGTAAGTGGTAAATG-TCTGCGTTTGACG 604 Query 517463 CAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 | ||||| ||||||||||| | || | | ||||||||| ||| || Sbjct 603 CGTTGGAATGGTTGTGTTTCTTTTGATCAAACTGGTCATAACACCGCC 556 >seq32350 Length=461 Score = 141 bits (156), Expect = 7e-28 Identities = 198/277 (71%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498 ||||||| ||||| |||||||| |||||||||| ||||| | ||||| ||| Sbjct 338 CATTAATCACTTTGAATGGCCAAAGTTTCATATCTTTATGAACTTCCTTGTCATCGAAAC 279 Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558 |||||||||||||| ||||| || || || ||||| || ||| | ||| |||||| Sbjct 278 TTCTACCAATTAATCTCTTTGCGTCGAATATTGTATTTAATGAATTCTTCGCAACTTGAT 219 Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618 ||| |||| ||||| || || | ||| | || ||||| | |||||||||||||| | Sbjct 218 GTTTAGCTGAGTCTCCTATAAGGAGCTCTTTGTCAGTAAACGCCACATATGATGGAGTAG 159 Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTT---TGCCATACACCTA 518675 | | ||| || ||||| || || || || || ||||| || | | ||| |||| || Sbjct 158 TCCTATTTCCCTGATCGTTGGCGATTATCTCGACTTTTCCGTGTTGNTGCAATACTCCAC 99 Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || | | |||| ||| |||||||| || || || Sbjct 98 CATATGAATTTGTTGATCCCAAATCAATTCCGATTGC 62 >seq2686 Length=485 Score = 111 bits (122), Expect = 1e-18 Identities = 263/389 (68%), Gaps = 20/389 (5%) Strand=Plus/Minus Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTCAA 517971 |||||||| || |||| || |||| | || |||| |||||| | ||| || ||| Sbjct 379 CGTTTAGCTATTTTGGATGCCGTTCTTAAACGTC-TAAGAGCTTTT--TTATTTAT-CAA 324 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 || | |||| | | || || ||||||||| | | | || | || || ||||| Sbjct 323 AT-----TGATATGCTTTTTTAAATTCTTCAACAAAGTTTTTAACCATTCGGTTGTCAAA 269 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT--CC---A 518086 ||||| |||||||| | ||||| | | || | | |||| ||||| || | Sbjct 268 ATCTTGGCCTCCCAAGTGAGTATCACAATATGTTGACTTAACTTC--AAAGTTACCTTTA 211 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 ||| ||| | | | | |||||| ||||||||||| | |||||| || | |||| Sbjct 210 TCTACAATA---AGTATTGATACATCTAACGTTCCACCACCTAAATCAAAGATTACTACA 154 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 || | ||| | | || ||||| | |||||| |||| |||||||| || ||||| Sbjct 153 TTTGTGTCTACCTGATATTTCTTATCTAAACCATAAGCAATGGCAGCAGCTGTCGGTTCG 94 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || |||||| ||| | ||| ||||||| | |||| |||||||||| ||||| ||| Sbjct 93 TTGATAATTAGCAATATATTTAGACCAGATAAAGTTCCATCATCTTTAGTCGCTTGCCTT 34 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGT 518295 || || || || ||| | | ||||| || Sbjct 33 TGAGAGTCATTGAAACAAGATGGAACTGT 5 >seq95264 Length=750 Score = 109 bits (120), Expect = 4e-18 Identities = 175/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||| || || | || |||| | |||||| || ||||||||||| || ||||||||||| Sbjct 10 TTAA-ACAAGAATTTGTTCCAGAATCTTTTGTTGCTTGTCTTTGAGAGTCGTTAAAATAA 68 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 | |||||||| ||||| |||| ||||| | | | |||| || | || ||| | Sbjct 69 ACTGGAACAGTGATAACAGCATTTGTTACATTTATTCCAAGGTATACATCCGCGATTTCT 128 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTT 518404 ||||| ||| | || | ||| || |||||| |||||| ||| | ||||| ||| | Sbjct 129 TTCATCTTATTCAATACCATAGACGAAATTACTTCTGGAAAATCGT-CTTGGTTTCTCTA 187 Query 518405 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTAT 518464 ||| ||||||| | || || | |||||||||||||||||||||| Sbjct 188 CAATACTTCACTTCAATCTTAGGCTTCCCTTCCTCATTAATAACTTTAAATGGCCAACTC 247 Query 518465 TTCATATCT 518473 || |||||| Sbjct 248 TTTATATCT 256 >seq93545 Length=15837 Score = 102 bits (112), Expect = 6e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 |||| || | ||| ||||||| || ||||| |||||||| || || | | ||| |||| Sbjct 15661 TTTTGTCCATACCGTACGCAATTGCGGCAGCGGTTGGTTCGTTGATCACACGCAACACAT 15720 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 | | || || || ||| || ||||||||||| |||||||| || || || ||||||| Sbjct 15721 TCAAGCCTGCGATCTGTCCCGCGTCTTTAGTGGCCTGTCTTTGCGAGTCATTGAAATATG 15780 Query 518286 CAGGAACAGTAATAACGGCAT 518306 | |||||||| || || |||| Sbjct 15781 CGGGAACAGTTATCACCGCAT 15801 >seq11063 Length=374 Score = 102 bits (112), Expect = 6e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 518186 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 518245 || || |||||| |||||| ||| ||| |||||||| || || |||||| | | Sbjct 183 AATGCTGCAGCAACCGGTTCAGGAATTATTTCTAAAACATTTAGTCCCGCAATTGTGGCC 242 Query 518246 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 518305 |||||||| || || ||| | ||||||||||||||||||||||| || || ||||||||| Sbjct 243 GCATCTTTTGTTGCCTGTTTCTGTGAATCGTTAAAATATGCAGGTACTGTTATAACGGCA 302 Query 518306 T 518306 | Sbjct 303 T 303 Score = 87.8 bits (96), Expect = 1e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 322256 GCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAA 322315 ||||| ||| |||||| |||||||| | ||||| || ||||||||| | || | | Sbjct 186 GCTGCAGCAACCGGTTCAGGAATTATTTCTAAAACATTTAGTCCCGCAATTGTGGCCGCA 245 Query 322316 TCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTA 322375 || ||||| ||| |||||| || ||||||||||| ||||| || ||||| || || Sbjct 246 TCTTTTGTTGCCTGTTTCTGTGAATCGTTAAAATATGCAGGTACTGTTATAACGGCATTC 305 Query 322376 TTAATA 322381 |||||| Sbjct 306 TTAATA 311 >seq34509 Length=4334 Score = 100 bits (110), Expect = 2e-15 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 870788 ACAAAGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGA 870847 |||||||| | || |||||||| | | |||||||| || ||||| |||||| | ||| Sbjct 1792 ACAAAGAATAGTA--GTCGATTACAGTGCACCAAATATAGCGAAAGAGATGCATGTCGGA 1735 Query 870848 CATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACAC 870907 ||| | || || |||||||||||||| | | | || | || ||| | || || Sbjct 1734 CATCTTAGGTCTACTATTATTGGTGATGGTGTGTCCAGAATTTTGGAATTTCTAGGTTAC 1675 Query 870908 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTA 870961 |||||| ||| | |||||| | || || |||||||| ||||| ||||||||| Sbjct 1674 GATGTTCTACGTGTGAATCATATCGGAGACTGGGGAACGCAATTTGGTATGTTA 1621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3775783402610770