Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq94721 105 8e-18 seq97326 100 4e-16 seq95288 89.7 7e-13 seq77187 86.0 8e-12 >seq94721 Length=6748 Score = 105 bits (116), Expect = 8e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 104868 ATCCCACATATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATA 104927 ||||||||||||||| |||||||||||||| || || || || |||| || || Sbjct 1783 ATCCCACATATCGAACTGAAGAATACCTTTGGAAACTGGCGAACCAGCGTACGTCTCGTA 1842 Query 104928 AGGACCGTACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTC 104987 ||||| || ||| || | ||| || || ||| || | ||| || || ||||| Sbjct 1843 CGGACCCAACTTTTGAGCCAATTCGCAACTCGCTTCCAGAGCGCCGTAATATATCGTTTC 1902 Query 104988 GAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGAT 105047 ||||| | |||||| ||||| | |||||| || ||||||| ||| | | | || Sbjct 1903 AAATATTTGAATGTTAAGTTTACGCGATTCATCGCTTCCGAATGGCATACGCATTAGAAT 1962 Query 105048 AAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTC 105088 ||| ||||||| | || || ||||||||||| || |||| Sbjct 1963 AAAAGCGTCAGCCAATCCTTGCACACCAATACCTATTGGTC 2003 >seq97326 Length=4768 Score = 100 bits (110), Expect = 4e-16 Identities = 168/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 |||| |||||||| || ||||| || || || |||||||| |||||||| || | || Sbjct 2330 TCTTGTCGAGACCATAAGCGATGGCAGCAGCTGTTGGTTCGTTAATAATTCGCAT-CACA 2388 Query 7656 TCAGG-CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || | || || ||| | | || ||||| || || || || || | ||||| || || Sbjct 2389 ACAAGTCCGGCGATAACTCCGGCGTCTTTAGTTGCCTGACGCTGAGCGTCGTTGAAATAT 2448 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || || || |||| || ||||| ||||| | ||| | || || | ||| Sbjct 2449 GCGGGAACTGTCACCACAGCGTGTGTCACTTTTTTACCTAAATATGCCTCAGCAGTCTCT 2508 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCA 7831 |||||||| || | |||||| | |||||||| | || || ||| |||||| || Sbjct 2509 TTCATTTTTGTCAAAACCATTGCACTTATCTCTTCGGGTGCGAA-TGTCTTCGTTCCA 2565 Score = 96.9 bits (106), Expect = 4e-15 Identities = 219/328 (67%), Gaps = 6/328 (2%) Strand=Plus/Plus Query 6537 CATTCTTCGCCTCGACCTT---TTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCG 6593 ||||||||||||| ||||| ||| | ||||| || || || | ||||||||| Sbjct 1157 CATTCTTCGCCTCCACCTTGTCTTTAAC---CTTTTTGTCGTCGTCGGCAAACTTTTCCG 1213 Query 6594 CATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCG 6653 | |||| | ||| | || || ||||| | | || | ||||| || || | Sbjct 1214 CGTCTTTAATCATTCTCTCGATATCTTCGGGAGTGAGTCGATTGTGGTCATTAGTGATTG 1273 Query 6654 TAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTG 6713 | || ||||| || || | |||| ||||| ||| | || || | ||||||||| Sbjct 1274 TGATTTTTTCTTTATTTCCAGTTCCCTTGTCTTCGGCAGTAACTTTGAGAATACCATTCA 1333 Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCG 6773 | || | ||||| | || | ||||||||| ||| | |||||| | |||||||| | Sbjct 1334 CGTCTATCTCGAAGGTGACCTCAATTTGTGGCACACCTCGCGGTGCCGGAGGAATACCGG 1393 Query 6774 TTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGA 6833 ||||||| ||| |||| | | ||| || | | | |||||| |||||||| | Sbjct 1394 TTAAATCGAATTTACCCAAAAGGTGGTTGTCTTTTGTAAGCGGACGTTCGCCTTCATATA 1453 Query 6834 CTTTAATTGTCACCGCAGGTTGATTATC 6861 ||| ||||| || | | | |||||||| Sbjct 1454 CTTGTATTGTTACGGTATGCTGATTATC 1481 >seq95288 Length=1419 Score = 89.7 bits (98), Expect = 7e-13 Identities = 198/297 (67%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| || || ||||| || || || || |||| ||||| |||| || |||||||| Sbjct 930 CTTGTCGTCCTCATCCTTGTAAGACTCGGCCTCTTTAACCATTCTTTCGATATCTTCTTT 871 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 | ||| ||||||||||| || || || || || | |||||||| ||| || Sbjct 870 GCTGAGTCTTCCCTTATCATTAGTGATAGTGATTTTGTTCTCTTTACCCGTACTCTTGTC 811 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | || | ||||| | |||||| || || || | ||||||| | || | ||| || || Sbjct 810 AGCTGCGGTCACATTGAGAATACCGTTAGCGTCGATATCGAACGTGACCTCAATCTGCGG 751 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 | ||| | || || | || ||||| || || || || | || || ||| |||| || Sbjct 750 TACACCGCGTGGCGCAGGGGGTATACCAGTCAACTCGAACTTTCCGAGCAAATTGTTGTC 691 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861 | | | || || || ||||| || |||| ||| || | |||||||| || Sbjct 690 TTTGGTCATCGCTCGCTCTCCTTCGTACACTTGAATCAGAACTCCCGGTTGATTGTC 634 >seq77187 Length=4015 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122 || || ||||| ||||||||||||||||| || || || ||||| ||||| | ||||||| Sbjct 3405 TACTCTCCGACACGCTTTTCAAAAAAGTTAGTCTTTCCTTCGAGCGATATTTGCTCCATA 3346 Query 115123 AAATCAAAGGGATTTTT 115139 || ||||| |||||||| Sbjct 3345 AAGTCAAATGGATTTTT 3329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634326617997800