Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq72717 104 3e-17
seq87608 93.3 5e-14
seq26117 93.3 5e-14
>seq72717
Length=3270
Score = 104 bits (114), Expect = 3e-17
Identities = 348/538 (65%), Gaps = 8/538 (1%)
Strand=Plus/Minus
Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355
|| ||| | || || |||| |||| ||||||||||||||| ||| || ||||| |
Sbjct 594 TCCCAAGCAGAAACAGGTAATCCATTTATGCTTTACAAAGATAGCTGCAATCAAAAAACA 535
Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415
|| ||||| ||| | || || || || || | || || ||||| | |||||
Sbjct 534 AACCAAAAAAATATTGGCACAATTAAATGTGGAAATTTATGCACTGAAATTATTCAATTT 475
Query 112416 AC-AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474
| || | || | || | |||| || ||| | || || |||||||| || | ||
Sbjct 474 TCTAGTCCAA-AAGAAATATCTGTTTGCAACTTAGCTTCTATCGCTCTAAATAAATTCGT 416
Query 112475 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 112534
| || | || || || ||| ||| ||||||||| | || || ||||| |||||
Sbjct 415 GAATAAAACAACTAAAACTTTTAATTTTGAAAAACTAAAAAAAATTGTGAAAATAGTCAC 356
Query 112535 AAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAA 112591
| ||| || || | | |||| |||| ||||| ||||||| | |||| || |
Sbjct 355 AGTAAATCTTAATAAAATTATAGATAAAAATTATTACCCCTTACCTGAGTGTGAAC---T 299
Query 112592 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651
||| || | | ||| || ||||| || | |||||||||||||| || ||| || ||
Sbjct 298 ATCAAACAAAAAACATCGACCAATCGGAGTTGGTGTCCAAGGTCTAGCTGATACTTTTAT 239
Query 112652 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGA 112711
| | | |||| ||| || | | || | ||| ||| ||| |
Sbjct 238 ATTGATGGGTCTGCCATTCTATTGTGATGCGTCTCGTGAGTTGAATAAAATTATTTTTCA 179
Query 112712 GACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATA 112771
||||| || | ||||||| || || | || || || ||| |||||||||
Sbjct 178 AACAATATACTTTGGTTCTCTTGAAGCAAGCTGCGAATTAGCTGAGAAATTTGGTCCATA 119
Query 112772 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829
|||| | ||| | ||||| |||| |||| |||| | || |||| || |||||||||
Sbjct 118 TGAATCATTTAAAGGTTCGCCAGTTTCAAAAGGAATACTACAATACGACATGTGGGAA 61
>seq87608
Length=6889
Score = 93.3 bits (102), Expect = 5e-14
Identities = 238/361 (66%), Gaps = 6/361 (2%)
Strand=Plus/Minus
Query 175839 AACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGA 175898
||||||| ||||||||||| || ||||| |||||||| || ||| |||||| || |
Sbjct 3114 AACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAA 3055
Query 175899 AGTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCG 175958
| || ||||| || | |||||| | | ||| ||||||| || ||||| |
Sbjct 3054 ATTCAGGCTCGATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTG 2995
Query 175959 GATCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACG 176018
| || || |||||||| | ||| ||||||||||||| | | || ||
Sbjct 2994 GCGAGAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAG---GACTCG 2938
Query 176019 CA---TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGA 176075
|| || || || ||| || ||||| ||||||||||| ||| | ||| | || |
Sbjct 2937 CAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAA 2878
Query 176076 TATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTT 176135
|||| || || | |||| | || || |||| ||| || | ||||| |||
Sbjct 2877 TATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGTTGACATTAGAGACGCTT 2818
Query 176136 CACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCT 176195
| ||||| ||||| || | ||| | || | |||||| || |||||||||| ||
Sbjct 2817 CTCCGTGATGGTATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCT 2758
Query 176196 C 176196
|
Sbjct 2757 C 2757
>seq26117
Length=267
Score = 93.3 bits (102), Expect = 5e-14
Identities = 179/264 (68%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369
||| |||||||||||||| ||||||||| || || ||| | || || | |||||
Sbjct 264 TGGAACACCATATATGCTCTACAAAGACAGTTGCAATAGAAAAACAAACCAGATAAATTT 205
Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429
|| || || | || || | ||||||||||| | | |||||| ||||||||
Sbjct 204 AGGCACAATAAATTGCTCAAATTTATGTACAGAAATAATACAGTTTACATCTAAAGATGA 145
Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489
|| | || || ||| | || | ||||| | ||||| ||| ||| | |||
Sbjct 144 GATATCAGTATGCAACTTAGCCACTATCGCATTAAACAAGTTTGTTGATAAGTCAAAAAA 85
Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549
|||||| |||| |||| | | |||||||| |||| | | || |||||| || |
Sbjct 84 AACATTTAATTACTTAAAATTAAAGGAAGTTACTAAAATTATTACTGTAAACCTTAATAA 25
Query 112550 AGTTATTGATAGAAATTTTTACCC 112573
| ||||||| | ||||||||| ||
Sbjct 24 AATTATTGACATAAATTTTTATCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 619954483912400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |