Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq72717 104 3e-17 seq87608 93.3 5e-14 seq26117 93.3 5e-14 >seq72717 Length=3270 Score = 104 bits (114), Expect = 3e-17 Identities = 348/538 (65%), Gaps = 8/538 (1%) Strand=Plus/Minus Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 || ||| | || || |||| |||| ||||||||||||||| ||| || ||||| | Sbjct 594 TCCCAAGCAGAAACAGGTAATCCATTTATGCTTTACAAAGATAGCTGCAATCAAAAAACA 535 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 || ||||| ||| | || || || || || | || || ||||| | ||||| Sbjct 534 AACCAAAAAAATATTGGCACAATTAAATGTGGAAATTTATGCACTGAAATTATTCAATTT 475 Query 112416 AC-AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 | || | || | || | |||| || ||| | || || |||||||| || | || Sbjct 474 TCTAGTCCAA-AAGAAATATCTGTTTGCAACTTAGCTTCTATCGCTCTAAATAAATTCGT 416 Query 112475 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 112534 | || | || || || ||| ||| ||||||||| | || || ||||| ||||| Sbjct 415 GAATAAAACAACTAAAACTTTTAATTTTGAAAAACTAAAAAAAATTGTGAAAATAGTCAC 356 Query 112535 AAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAA 112591 | ||| || || | | |||| |||| ||||| ||||||| | |||| || | Sbjct 355 AGTAAATCTTAATAAAATTATAGATAAAAATTATTACCCCTTACCTGAGTGTGAAC---T 299 Query 112592 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651 ||| || | | ||| || ||||| || | |||||||||||||| || ||| || || Sbjct 298 ATCAAACAAAAAACATCGACCAATCGGAGTTGGTGTCCAAGGTCTAGCTGATACTTTTAT 239 Query 112652 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGA 112711 | | | |||| ||| || | | || | ||| ||| ||| | Sbjct 238 ATTGATGGGTCTGCCATTCTATTGTGATGCGTCTCGTGAGTTGAATAAAATTATTTTTCA 179 Query 112712 GACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATA 112771 ||||| || | ||||||| || || | || || || ||| ||||||||| Sbjct 178 AACAATATACTTTGGTTCTCTTGAAGCAAGCTGCGAATTAGCTGAGAAATTTGGTCCATA 119 Query 112772 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 |||| | ||| | ||||| |||| |||| |||| | || |||| || ||||||||| Sbjct 118 TGAATCATTTAAAGGTTCGCCAGTTTCAAAAGGAATACTACAATACGACATGTGGGAA 61 >seq87608 Length=6889 Score = 93.3 bits (102), Expect = 5e-14 Identities = 238/361 (66%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 175839 AACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGA 175898 ||||||| ||||||||||| || ||||| |||||||| || ||| |||||| || | Sbjct 3114 AACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAA 3055 Query 175899 AGTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCG 175958 | || ||||| || | |||||| | | ||| ||||||| || ||||| | Sbjct 3054 ATTCAGGCTCGATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTG 2995 Query 175959 GATCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACG 176018 | || || |||||||| | ||| ||||||||||||| | | || || Sbjct 2994 GCGAGAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAG---GACTCG 2938 Query 176019 CA---TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGA 176075 || || || || ||| || ||||| ||||||||||| ||| | ||| | || | Sbjct 2937 CAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAA 2878 Query 176076 TATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTT 176135 |||| || || | |||| | || || |||| ||| || | ||||| ||| Sbjct 2877 TATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGTTGACATTAGAGACGCTT 2818 Query 176136 CACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCT 176195 | ||||| ||||| || | ||| | || | |||||| || |||||||||| || Sbjct 2817 CTCCGTGATGGTATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCT 2758 Query 176196 C 176196 | Sbjct 2757 C 2757 >seq26117 Length=267 Score = 93.3 bits (102), Expect = 5e-14 Identities = 179/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 ||| |||||||||||||| ||||||||| || || ||| | || || | ||||| Sbjct 264 TGGAACACCATATATGCTCTACAAAGACAGTTGCAATAGAAAAACAAACCAGATAAATTT 205 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 || || || | || || | ||||||||||| | | |||||| |||||||| Sbjct 204 AGGCACAATAAATTGCTCAAATTTATGTACAGAAATAATACAGTTTACATCTAAAGATGA 145 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 || | || || ||| | || | ||||| | ||||| ||| ||| | ||| Sbjct 144 GATATCAGTATGCAACTTAGCCACTATCGCATTAAACAAGTTTGTTGATAAGTCAAAAAA 85 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 |||||| |||| |||| | | |||||||| |||| | | || |||||| || | Sbjct 84 AACATTTAATTACTTAAAATTAAAGGAAGTTACTAAAATTATTACTGTAAACCTTAATAA 25 Query 112550 AGTTATTGATAGAAATTTTTACCC 112573 | ||||||| | ||||||||| || Sbjct 24 AATTATTGACATAAATTTTTATCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619954483912400