Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq87608 96.9 4e-15 >seq87608 Length=6889 Score = 96.9 bits (106), Expect = 4e-15 Identities = 281/429 (66%), Gaps = 18/429 (4%) Strand=Plus/Minus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 ||||| |||||||| || |||||||| |||||||| || | |||||| ||||| Sbjct 3112 CCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAAAT 3053 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCC--AAG-TAGTTGAGGATCGGGTCATCCCGA 168407 || || || ||| | || ||| || ||| || ||||| | |||||||||| | Sbjct 3052 TCAGGCTCGATTTT---CAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGT 2996 Query 168408 GGATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAA 168467 || || || || || ||| |||| |||| || || || | | | | Sbjct 2995 GGCGAGAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCGCA 2936 Query 168468 GCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATG 168527 || || || || ||| || ||||| ||||| ||||| ||||| ||| | |||||| Sbjct 2935 GCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAATA 2876 Query 168528 TTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCA 168587 || || || |||| | || || || | ||| || | || || |||| Sbjct 2875 TTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGTTGACATTAGAGACGCTTCT 2816 Query 168588 CCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCA----- 168642 || || ||||| || || | || | || | |||||||||||||||| |||| Sbjct 2815 CCGTGATGGTATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCTCT 2756 Query 168643 -TTTCATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTG 168701 ||| ||| || | |||| ||||||| |||||||||||| |||||| ||| || Sbjct 2755 CTTTTATCGTTACG---CTTA---AAGCAAGTATACATCACTTTTCTCTGTCCAGGTTTC 2702 Query 168702 AGACCATCC 168710 | ||||||| Sbjct 2701 AAACCATCC 2693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589231929995800