Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq100917 134 3e-26 seq44500 98.7 2e-15 seq39385 96.9 8e-15 >seq100917 Length=15418 Score = 134 bits (148), Expect = 3e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || || ||||| || |||||||| || || ||||||||| || || Sbjct 7781 TCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTTAGTGT 7722 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | ||| || || ||||| || | || || || || ||||||||||| Sbjct 7721 TCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGAATGCC 7662 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| ||||| || ||| || ||||| ||||||||||| |||||||| || Sbjct 7661 CTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACTTCGAG 7602 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||| || || | || || ||||| | ||||||| Sbjct 7601 CGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTT 7558 >seq44500 Length=545 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| || ||||| ||| | || || | ||| |||||||| || ||||| ||||| Sbjct 214 CAAAACCAGTTGAAGTGTGCAATCCTTCTCAATGTTGTAATCATTGAGTGTTCTTCCATC 155 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || | || || ||||| ||| || || || |||||||||||||| || || Sbjct 154 TTCCAGTTGTCTGCCGGCAAAGATCAGTATCTGCTGATCGGGAGGAATGCCTTCCTTTTC 95 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGG 195076 | ||| ||| |||||| ||||| |||| Sbjct 94 CTCAATCTTTGTCTTGACATTCTCGATGG 66 >seq39385 Length=5141 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || |||||||| |||||| || ||||| |||||||| || || || || |||||||| Sbjct 206 TTCTGAATATTATAATCGCTGAGTGTTCTTCCATCTTCCAGTTGTTTGCCAGCGAAGATC 147 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||||| || || || |||||||||||||| ||||| ||||| Sbjct 146 AGTCGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAAT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108038114165015