Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq95281 82.4 2e-11 >seq95281 Length=916 Score = 82.4 bits (90), Expect = 2e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 957 TTTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATG 1016 || ||| ||||||| |||||| |||| || |||||||| || ||||| | || |||| Sbjct 874 TTACCAAATGGATGCTATGGTCGAATCGCACCTAGGTCTGGGTTAGCA--TTAGCTTATT 817 Query 1017 ATTGATGTGGGT--GCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTT 1074 || | || | ||||||||||| |||||||| | || || || ||||| || | | Sbjct 816 CTTTAAATGTTTTGGCTGGTGTTATAGATCCAGATTATAAAGGAAATGTTGGAATTTTGT 757 Query 1075 TATTTAATTTTAGCGATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAA 1134 |||||||| | | || || |||| | ||| | |||||||| |||| || ||| Sbjct 756 TATTTAATCATGGAGAAAAAGATTTTGAAATTAAACAGGGTGATAGAGTTGCACAACTAA 697 Query 1135 T 1135 | Sbjct 696 T 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138514371226020