Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq100917 122 7e-23 seq95989 91.5 1e-13 >seq100917 Length=15418 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || | |||||| || || ||||| ||||| ||||||||| Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || || || || || || |||||||| ||||| ||||| || ||| Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || ||||| || || ||| | || | ||||| |||| |||||| Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || || || | || || || ||||||||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 >seq95989 Length=12046 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 || ||||||||| | ||| | ||| |||||||| |||||||||||||| || || ||||| Sbjct 11924 ATCTCCTCCTCTGAGACGAAGAACCAAATGAAGAGTAGATTCTTTTTGGATGTTATAATC 11983 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | ||| | |||| || | ||| || ||||| |||||||| || || |||||||| Sbjct 11984 ACTTAAAGTGCGTCCATCCTCTAGTTGTTTGCCTGCGAATATCAATCGTTGCTGATCGGG 12043 Query 101359 CGG 101361 || Sbjct 12044 AGG 12046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395787973901565