Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq100917 107 1e-18 seq94648 89.7 4e-13 >seq100917 Length=15418 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 ||||||| || || |||| ||||| ||| || || |||||| || || |||||||| Sbjct 7788 CGCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGC 7729 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| ||| |||| || ||||| || || || ||||||| ||||| ||||| | | Sbjct 7728 TTAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAG 7669 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 ||| |||||||||||| |||||| || ||| | | | || |||| ||||| Sbjct 7668 GAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCA 7609 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || | ||| || || || || || | || || || || |||||||| Sbjct 7608 CTTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCAT 7560 >seq94648 Length=7301 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 48536 GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATC 48595 |||||| || || || || | || || || || || |||||| || | || ||||| Sbjct 5062 GTCGCCACCTCTGAGACGAAGAACTAAGTGAAGTGTCGACTCTTTCTGTACGTTATAATC 5121 Query 48596 AGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGT 48655 || | ||| ||||| |||| || || ||| |||||||||||| || || || Sbjct 5122 GCTTAAAACTCGTTCGTCTTCCAGTTGTTTGCCGCCAAATATCAGTCTTTGCTGGTCAAC 5181 Query 48656 GGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTAC----AGAACCCACAGACTCTGACG 48711 |||| || ||| || ||| ||||||| ||||| ||| ||| | |||| || Sbjct 5182 AGGAATGCTCTCTTTATCGGCAATCTTTGACTTTACCAGTTGAA--CACTG--TCTGTCG 5237 Query 48712 CCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || | |||||| ||||| || |||| || || ||||| |||||||| Sbjct 5238 GTTCCACGTCTAACGTAATAGTTTTGCCATTCAATGTCTTAACAAAGATCTGCAT 5292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380466159364035