Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq97326 154 2e-32 seq2686 131 2e-25 seq95288 111 2e-19 seq44500 102 1e-16 seq39385 96.9 5e-15 >seq97326 Length=4768 Score = 154 bits (170), Expect = 2e-32 Identities = 255/365 (70%), Gaps = 5/365 (1%) Strand=Plus/Minus Query 195625 ATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATC 195684 ||| || |||||||| || | ||||| |||| || ||||| |||||||| || | Sbjct 2553 ATTCGCACCCGAAGAGATAAGTGCAATGGTTTTGACAAAAATGAAAGAGACTGCTGAGGC 2494 Query 195685 TTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTC 195744 | | ||||||| |||| | | || || ||||| || || || || |||| || | Sbjct 2493 ATATTTAGGTAAAAAAGTGACACACGCTGTGGTGACAGTTCCCGCATATTTCAACGACGC 2434 Query 195745 ACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTA 195803 || || ||||| || || ||||| | | ||| || || || ||| | |||||| Sbjct 2433 TCAGCGTCAGGCAACTAAAGACGCCGGAGTTATCGCCGGACTTGT-TGTGATGCGAATTA 2375 Query 195804 TCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATA 195863 | || ||||||||||| ||||| || ||||||||||| |||||| | || | ||| | Sbjct 2374 TTAACGAACCAACAGCTGCTGCCATCGCTTATGGTCTCGACAAG---AGAGAGGGAGAGA 2318 Query 195864 AAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTG 195923 | ||| | ||| | || ||| | || ||||| || || ||||| |||||||| | ||| | Sbjct 2317 AGAATATTTTGGTGTTCGATTTGGGCGGTGGAACTTTCGATGTGTCACTTCTTACTATCG 2258 Query 195924 AAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATT 195983 | ||| | |||||||| | ||| ||| ||||| ||||| || || ||||| | Sbjct 2257 ATAATGGCGTGTTCGAAGTGGTTTCCACTAATGGCGATACGCATCTCGGAGGAGAAGACT 2198 Query 195984 TCGAT 195988 | ||| Sbjct 2197 TTGAT 2193 Score = 120 bits (132), Expect = 4e-22 Identities = 180/256 (70%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 196604 ATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTC 196663 || |||||||||||||| ||||| | | | |||| || ||||| || | || | ||| Sbjct 1460 ATACAAGTATATGAAGGCGAACGTCCGCTTACAAAAGACAACCACCTTTTGGGTAAATTC 1401 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 ||||| || || ||||| | ||||| ||||||| ||||| ||| | || |||||| Sbjct 1400 GATTTAACCGGTATTCCTCCGGCACCGCGAGGTGTGCCACAAATTGAGGTCACCTTCGAG 1341 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 ||||||| ||||| ||||| || || || || || ||||||| |||| || ||| Sbjct 1340 ATAGACGTGAATGGTATTCTCAAAGTTACTGCCGAAGACAAGGGAACTGGAAATAAAGAA 1281 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 || || || || |||||| | || || || || || || || | ||| || Sbjct 1280 AAAATCACAATCACTAATGACCACAATCGACTCACTCCCGAAGATATCGAGAGAATGATT 1221 Query 196844 CAAGATGCGGAAAAGT 196859 |||| |||||||||| Sbjct 1220 AAAGACGCGGAAAAGT 1205 >seq2686 Length=485 Score = 131 bits (144), Expect = 2e-25 Identities = 197/276 (71%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 || || || || ||| |||| ||| || ||| | || ||||| || || | || || Sbjct 2 GTCACAGTTCCATCTTGTTTCAATGACTCTCAAAGGCAAGCGACTAAAGATGATGGAACT 61 Query 195776 ATTGCGGGTCTAAACTGTCTTAG-AATTATCAATGAACCAACAGCGGCTGCAATTGCTTA 195834 | | |||||||| | | || ||||||||| ||||| ||||| ||||| |||||||| Sbjct 62 TTATCTGGTCTAAA-TATATTGCTAATTATCAACGAACCGACAGCTGCTGCCATTGCTTA 120 Query 195835 TGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 |||| | || ||||| | | | ||| | ||||||| | ||||||||| | |||||||| Sbjct 121 TGGTTTAGATAAGAAATATCAGGTAGACACAAATGTAGTAATCTTTGATTTAGGTGGTGG 180 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGT---GGTATATTCGAAGTAAAGGCTAC 195951 ||||| ||||| ||| | || ||||| || | |||| || ||||| ||| | || Sbjct 181 AACGTTAGATGTATCAATACT---TATTGTAGATAAAGGTAACTTTGAAGTTAAGTCAAC 237 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | |||||||||| | || || ||||||| || Sbjct 238 ATATTGTGATACTCACTTGGGAGGCCAAGATTTTGA 273 >seq95288 Length=1419 Score = 111 bits (122), Expect = 2e-19 Identities = 251/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 196505 GGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC---TAAGAAGGA- 196560 || ||||||||||| | | || | || |||||||| ||||| || | | | | | Sbjct 556 GGCGGTGTTATGACCAGTTTGATCAAAAGAAACACAACCATTCCAACGCGTCAAACGCAG 615 Query 196561 ACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGG 196620 ||| ||| | || || ||| |||||||| || |||| |||||||| || ||||| Sbjct 616 ACA----TTTACCACTTACAGCGACAATCAACCGGGAGTTCTGATTCAAGTGTACGAAGG 671 Query 196621 AGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCC 196680 ||| || | | || || ||| || | || |||| ||||| ||||| || || || Sbjct 672 AGAGCGAGCGATGACCAAAGACAACAATTTGCTCGGAAAGTTCGAGTTGACTGGTATACC 731 Query 196681 AGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAAT 196740 |||| || | ||||| || |||||| | || |||||||| ||||| || || || Sbjct 732 CCCTGCGCCACGCGGTGTACCGCAGATTGAGGTCACGTTCGATATCGACGCTAACGGTAT 791 Query 196741 TCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAA 196800 ||| || || || || | |||||| | | || ||| | || || || || || Sbjct 792 TCTCAATGTGACCGCAGCTGACAAGAGTACGGGTAAAGAGAACAAAATCACTATCACTAA 851 Query 196801 TGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTA 196860 ||| ||||| | || || || || || ||| | |||||| |||| || || || Sbjct 852 TGATAAGGGAAGACTCAGCAAAGAAGATATCGAAAGAATGGTTAAAGAGGCCGAGTCTTA 911 Query 196861 CAGGGAAGAAGACGA 196875 || ||| || ||||| Sbjct 912 CAAGGATGAGGACGA 926 >seq44500 Length=545 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 171928 ATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGA 171987 ||||| || |||| | |||||| | || |||||||||||||| ||||||||||| | Sbjct 68 ATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGCATTCCTCCCGATCAGCAGATA 127 Query 171988 CTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAA 172047 || || ||||| || | ||| || ||||||||| | || ||| |||||||||| || | Sbjct 128 CTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACACTCAATGATTACAACATTGAG 187 Query 172048 AAGGAGTCTACTCTACACCTTGTT 172071 ||||| | || || || || ||| Sbjct 188 AAGGATTGCACACTTCAACTGGTT 211 >seq39385 Length=5141 Score = 96.9 bits (106), Expect = 5e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||| || |||||||||||||| ||||||||||| ||||| || || ||||| ||||| Sbjct 106 ATTCAGGACAAGGAAGGCATTCCTCCCGATCAGCAGCGACTGATCTTCGCTGGCAAACAA 165 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 || ||||||||| | || ||| ||||| || |||| |||| Sbjct 166 CTGGAAGATGGAAGAACACTCAGCGATTATAATATTCAGAAGG 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657027367032400