Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq96803 185 1e-41 seq95739 147 3e-30 seq67252 141 1e-28 >seq96803 Length=7468 Score = 185 bits (204), Expect = 1e-41 Identities = 613/939 (65%), Gaps = 18/939 (2%) Strand=Plus/Minus Query 17857 ATTAGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGA 17916 ||||| ||||| |||||||| ||| ||| ||||| ||||| | |||||||||||||| Sbjct 4149 ATTAGATTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGA 4090 Query 17917 TATTAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTAT-TAATT 17975 ||| | |||||||||||| || || | | | ||||||||| || ||||| Sbjct 4089 AATTTGCTCCATAAAATCAAAAGGGTTTTCCGACTGA-AATATTTTTGGACAATCTAATT 4031 Query 17976 CGTATAATAA-TCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATA 18034 | || | || | |||| || || |||| | || ||| ||| | ||||||||| Sbjct 4030 CC-ATGAGAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATG 3972 Query 18035 CCTAGTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCT 18094 || | || | | || |||||||| | | |||||||| || || ||| | ||| Sbjct 3971 CCAATTAAACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCT 3912 Query 18095 TTTATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATA-ATATAA 18153 || || | | || || | | ||| || |||| || | | ||| Sbjct 3911 CGAATAATTTCGACTATTTTATCCTCGCTCGGTTTGTTGCGAATGT-ATCGTCGAAATAC 3853 Query 18154 TAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGT 18213 || ||| ||||||||| ||||| |||||||| | || |||| ||| || ||||| || Sbjct 3852 TAGACATGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGT 3793 Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAA 18273 || || | | ||| || | || ||| | ||||||||| ||||| || || | ||| Sbjct 3792 CAAACCACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAA 3733 Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGC 18332 ||||| || ||||| ||| ||||| || | ||| | |||||||||| | ||| Sbjct 3732 AAATATCCCTTCAACAGCA-GCGAATGCAACTAAACGTTCAGCAAAAGAAGCTAAATTAT 3674 Query 18333 TCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAG 18392 | ||||| | |||||||| | | | | ||| ||||| | || || | Sbjct 3673 TAGAAATCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTG 3614 Query 18393 CATTAAACAAAT-CATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAA 18451 ||||||| ||| ||| | ||||||| || | ||||| || | | | || ||| Sbjct 3613 CATTAAATAAAAGCAT-TCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAA 3555 Query 18452 TACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCG 18511 |||||||| ||||| | | || || || || ||||| | |||||| | | || || Sbjct 3554 TACATTTCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCT 3495 Query 18512 GGATATTGAATCTCGC-TATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 | | |||| ||| | ||| ||||| ||| | | ||| |||||||| | || ||| Sbjct 3494 GTAACCTGAACCTCTCGTAT-AAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACT 3436 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627 || || |||||||| | || ||| | |||| || ||||| || | ||| Sbjct 3435 AGCGGCAAAAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTTAATTTATT 3376 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 | |||| ||| | ||| | || ||||||||| || ||||||||| || | || Sbjct 3375 GATCCAATCAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAATGAAGCTTG 3316 Query 18688 GGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTT 18747 || | ||||||||||| | | ||| | || || || ||||| | | | | || | Sbjct 3315 AGCTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACAAAACGCGT 3256 Query 18748 ATAATTTTTTATTAACATAGGTTCTTCCATTTTTCTAAT 18786 ||||| | ||| ||| ||||| || || |||||| Sbjct 3255 GACATTTTCTGTTAGCATTGGTTCATC---TTCTCTAAT 3220 >seq95739 Length=7868 Score = 147 bits (162), Expect = 3e-30 Identities = 568/869 (65%), Gaps = 52/869 (6%) Strand=Plus/Plus Query 17864 TTTTTG-TATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAA 17922 |||||| || ||||| |||||||| ||||| ||||| | |||||||||||||| || Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374 Query 17923 ATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATT--AATTCGTAT 17980 | |||||||||||||||||| | | ||||||||| ||| ||||| || Sbjct 375 CTCCATAAAATCAAATGGATT-TTCCACGCAAAATATTTTT-GGACATTCCAATTC-AAT 431 Query 17981 AATAATC-TATCTGCTACAAATTCGACATATTGTGACATCAAATCG--CAATTCATACCT 18037 || || | |||| || |||||||| | || ||| ||| || || |||||||| || Sbjct 432 AAGAAGCTTATCGGCAACAAATTCAATGTACTGTTTCAT--AAGCGAACAATTCATGCCG 489 Query 18038 AGTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTT 18095 | || |||| |||| |||||||| | |||||||| || || ||| | ||| Sbjct 490 ATTA--AAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTC 547 Query 18096 TTATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGT----GAT-TAT---- 18146 | | ||| | ||| ||||| | || || | ||| ||| ||| Sbjct 548 GAA------TAATTTCGCTA-ATTTT--CTCTTGGCTAGGTTTGTAGCGGATATATCGAC 598 Query 18147 AATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTAC 18206 | ||| || ||| ||||| ||| ||||| |||||||| | || |||||||| || | Sbjct 599 GAAATACTAGACATGCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGC 658 Query 18207 TAAACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGC---GAAAC 18263 |||| || || || | || |||||| | || ||| | ||||||||| | || | ||| Sbjct 659 TAAAAGTCAAACCAGACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAAC 718 Query 18264 TACTAGAAAAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTG 18322 ||| |||| |||||||| || || ||| || || || | ||| | ||||| ||| Sbjct 719 CACT-GAAA--AATATACCTTCGACAGCA-GCAAATGCAACTAAACGTTCAGAAAACGAA 774 Query 18323 TATTTATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATA 18382 | | || | || ||||| | || ||| | ||| | ||| || | Sbjct 775 TCTGTACTACTTGAAATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAAT 834 Query 18383 CTCTCTATAGCATTAAACAAA---TCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCG 18439 | || || |||||||| ||| | || ||| ||| |||| || || || | Sbjct 835 GTTTCGATTGCATTAAATAAAAGCAAACGTTGTTCGTTGCAATC---AATGTATGTTTGC 891 Query 18440 ATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAAC 18499 | | || ||||||||||| ||||| | |||| || || || ||||| | |||||| Sbjct 892 AAAAGCATGGAATACATTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAA 951 Query 18500 GATCTAGCCTCGGGATATTGAATCTCGC-TATAAAATCTTTCTACCAAATTCTCATTAAC 18558 | | || || | | |||| ||| | ||| ||||| |||| | | ||| |||||||| Sbjct 952 CAACGTGCTTCTGTAACCTGAACCTCTCGTAT-AAATCGTTCTGCGAGATTTTCATTAAC 1010 Query 18559 TATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATC 18618 || || ||| | || |||||||| | || |||| | ||| ||| |||| | Sbjct 1011 AATTCCATCACTTGCGGCAAAAAATGCGAGAATATATGATAAAAAACGTTGCTCATCCGC 1070 Query 18619 CTTGAGATTG---TTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCA 18675 || | ||| ||||| ||| | ||| | |||||||| || || |||||| Sbjct 1071 GTTCAATTTGTTATTCCAATCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCA 1130 Query 18676 AAAAGATGATTCGGCCTGTTTGTACATTT 18704 ||| || | || | | ||| ||||||| Sbjct 1131 AAACGAAGCTTGAGATTTTTTATACATTT 1159 >seq67252 Length=1665 Score = 141 bits (156), Expect = 1e-28 Identities = 544/841 (65%), Gaps = 40/841 (5%) Strand=Plus/Plus Query 17846 TTTTTATCAAAATTAGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTT 17905 ||||||| || |||| | ||| ||||| | |||||| | ||||| ||||| |||| Sbjct 480 TTTTTAT-AATATTAAATCTTTGATATTCGCTCACTTTTATTTCGAAAAAATTACTCTTA 538 Query 17906 CCTTCCAATGATATTAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTT--TT 17963 || | ||||||| | |||||||||||||||||| | | ||||| || | Sbjct 539 TTATCAATTGATATTTGTTCCATAAAATCAAATGGATTTTCCGAATAATAATGATTAATA 598 Query 17964 CTTGTATTAATTCGTATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAAT 18023 | | | | || | ||| | | |||| |||| ||||| | ||| | ||| |||| Sbjct 599 CATCCAAAATTT--TTTAAAAGTTTATCAGCTATGAATTCAATGTATAATTTCATTAAAT 656 Query 18024 CGCAATTCATACCTAGTAGT--CTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTAT 18081 | || ||||| |||| || ||| |||| ||||||||| || || Sbjct 657 CACAGTTCATTCCTATTANNNNCTG------------TCAA----AAATTCTTTTTCAAT 700 Query 18082 CTCAACAGACTCTTTTATTATGTTTATTACCCTAG-ATT-TTGGCAATTTATTAATTATG 18139 ||||| || | ||| || || | | || ||| |||| ||| || ||| Sbjct 701 AATAACAGCTTCCTGTATAATTTTCAAGATTTTATTATTATTGGG--TTTGTTTTTTAAA 758 Query 18140 TGATTATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAAT 18199 | ||| ||| |||||| ||| ||||||||| ||| | ||||||||||| || || | | Sbjct 759 T-ATT-TAA-ATAATAGACATGCAAAATCACAGTGAAGGCCTTCATCTCTTGAAATAAGT 815 Query 18200 TCGTTACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCG 18259 |||||||| |||||| || | || || | || ||||| |||| | || | || Sbjct 816 TCGTTACTTTGCGTTAAACCATTTAAAATTCCACGTTCTTTTATCCAATAAATAGCAGCA 875 Query 18260 AAACTACTAGAAAAGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA 18318 || || | ||| || || || ||||| ||| || || || | | ||| || |||| Sbjct 876 AATGAACCACTAAAAAAAATTCCTTCAACAGCA-GCAAATGCCACGAGTCTCTCTCCAAA 934 Query 18319 ACTGTATTTATTGCTCAGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACG 18377 || | | || ||| | ||||||||| ||||||||| ||| || || Sbjct 935 GCTA-ACATGTTTTTCATTTATCCATTTTAATGCCCATTCGGCTTTTTTTTTAATGCAAC 993 Query 18378 GTATACTCTCTATAGCATTAAACAA---ATCATCTTTTTCTTTGGAATCTTTTATATAAG 18434 ||| | | || | ||| | || || | ||| ||||| |||||| || | Sbjct 994 TAATATTATGGATTGAATTTATTAAGGTATTTTGTTTATCTTT---ATCTTTAATGAGTG 1050 Query 18435 TGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTAT 18494 | | | ||| ||| |||||||| || ||||| |||| | || || || |||| || Sbjct 1051 TATACAATAATAAACTGTACATTTCTGAGTGTATATTTTCAACTGCAATTTGCAAACCAT 1110 Query 18495 AAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCAT 18554 | || |||| || || | ||||| || | ||||||||||| ||||||| || | Sbjct 1111 AGAAGCATCTTGCTTCACTAATTTGAACATCACATAAAAATCTTTCTGCCAAATTTTCGT 1170 Query 18555 TAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCAT 18614 | ||||| |||||| | ||| ||||| || | || ||| || || ||| |||||| Sbjct 1171 TGACTATTCCGTCACTTGTTGCAAAAAAAGCGAGAATATAAGAAAAAAAGTGTCTTTCAT 1230 Query 18615 TATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCC 18674 | || | ||| ||| |||| ||||||| | ||| ||||||||| |||| Sbjct 1231 TTTCACTTAGAAGTAACCAATCATTGTAATCTTTTCCCAAATCTACTTCTTCCACAGTCC 1290 Query 18675 A 18675 | Sbjct 1291 A 1291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 730943025722000