Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq96803 194 3e-44 seq95739 187 5e-42 seq100917 91.5 3e-13 >seq96803 Length=7468 Score = 194 bits (214), Expect = 3e-44 Identities = 583/900 (65%), Gaps = 19/900 (2%) Strand=Plus/Minus Query 38819 CATCACATTGTATTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTC 38878 ||| ||||| ||||||| ||||| |||| |||||||||||| || |||||||||| Sbjct 4155 CATTACATTAGATTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTC 4096 Query 38879 TAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTAT 38938 ||||| ||| | |||||||||||| || |||| | | | ||||||||| | || Sbjct 4095 CAATGAAATTTGCTCCATAAAATCAAAAGGGTTTTCCGACTGA-AATATTTTTGGACAAT 4037 Query 38939 C-AATACATATAATAA-TCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAA 38996 | ||| | || | || | |||| || || |||||| || ||| ||| | | ||| Sbjct 4036 CTAATTCC-ATGAGAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAA 3978 Query 38997 TTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctaca 39056 ||||| || | ||| || ||| | ||||| | | |||||||| ||| ||| || Sbjct 3977 TTCATGCCAATTAAACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACG 3918 Query 39057 gcttgtttaattatcataattatattattttttgataatttatatttaatatgat--tcg 39114 |||| | ||| || | ||| |||| | ||| | ||| | || ||| Sbjct 3917 GCTTCTCGAATAATTTCGACTATTTTATCCTCGCTCGGTTTGTTGCGAATGT-ATCGTCG 3859 Query 39115 catataGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTAC 39174 | ||| || |||||||||||| |||||| ||||| || | ||| || | |||||| | Sbjct 3858 AA-ATACTAGACATGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGC 3800 Query 39175 TAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTAC 39234 ||||||| || || | | || ||| | | ||||| ||||||||| |||||||| || Sbjct 3799 TAAAAGTCAAACCACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAAC 3740 Query 39235 TAGAAAAGAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAA---ACATTA 39291 | ||| ||||| || || ||| || ||||| | || | | | ||| | || Sbjct 3739 CACTAAAAAATATCCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCTA 3680 Query 39292 ATTTATCATCTAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATAT 39351 | |||| | ||||||| || ||||| | ||| ||||| |||| | | ||||| Sbjct 3679 AATTATTA---GAAATCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCG 3623 Query 39352 TTTCTATAGCTTTAAAT-AATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 39410 |||| || || |||||| || ||| Sbjct 3622 TTTCAATTGCATTAAATAAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAA 3563 Query 39411 NNNNNAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGC 39470 ||||||||||| ||||| ||| || || || ||||||||| |||||| Sbjct 3562 GTAAT-GAATACATTTCTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAA 3504 Query 39471 CTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATA 39530 | |||||||| | |||||| || | ||||||||| | | ||| ||| |||| Sbjct 3503 CGTGCTTCTGTAACCTGAACCTCTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACT 3444 Query 39531 CCATCAGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTT 39590 |||||| || || || ||||| | || ||| | ||| || ||||| ||| Sbjct 3443 CCATCACTAGCGGCAAAAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTT 3384 Query 39591 AA---ATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAA 39647 || ||| |||| || |||| | |||||| ||||| |||| ||||||||| Sbjct 3383 AATTTATTGATCCAATCAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAAT 3324 Query 39648 GATGCTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACA 39707 || ||| | |||||| |||||||| ||| ||| ||| ||| | ||||| | |||| Sbjct 3323 GAAGCTTGAGCTTTTTTGTACATTTGCCATAAATCGTAATATTCTACTGGAAACACCACA 3264 >seq95739 Length=7868 Score = 187 bits (206), Expect = 5e-42 Identities = 596/922 (65%), Gaps = 23/922 (2%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || |||||||||||||||||| || |||||||||| ||||| || Sbjct 315 TTTTTGATACTCTCCAACTTTTTTTTCGAAAAAATTGCTTTTTCCTTCCAATGAAATATG 374 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTT-CTCCTATCAATACATATA 38949 | |||||||||||||||| |||| | ||||||||| | | |||| || ||| Sbjct 375 CTCCATAAAATCAAATGGA-TTTTCCACGCAAAATATTTTTGGACATTCCAATTCA-ATA 432 Query 38950 ATAATC-TATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 | || | ||||||| |||||||||| || ||| ||| | ||||||||| || | | Sbjct 433 AGAAGCTTATCGGCAACAAATTCAATGTACTGTTTCATAAGCGAACAATTCATGCCGATT 492 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 || || ||||||||||||| | |||||||| ||| ||| || |||| | ||| Sbjct 493 AAAGAAACTGGTAATGCATCAATTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAATA 552 Query 39069 atcataattatattattttttgata-atttatatttaatatgattcgc-atataGTAAAC 39126 || | || || | || | || ||| || |||| || | | ||| || || Sbjct 553 AT-TTCGCTAATTTTCTCTTGGCTAGGTTTGTAGCGGATAT-ATCGACGAAATACTAGAC 610 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 ||||||| || |||| ||||| || | ||| || |||||||| |||||||| || | Sbjct 611 ATGCAAAGTCACAGTGTAGTCCTTCATCACGAGAGATTAATTCATTGCTAAAAGTCAAAC 670 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGA 39243 | | || || || | | ||| | ||||||||| | |||| ||| ||| |||| | Sbjct 671 CAGACAGTATACCACGTTGTTTGATCCAAAATATGGCCGCAAAGGAACCACT-GAAA--A 727 Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 39303 ||||||| || ||| |||||||| | || | | | |||| | || | | Sbjct 728 ATATACCTTCGACAGCAGCAAATGCAACTAAACGTTCAGAAAACGAATCTGTACTACTTG 787 Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363 ||||||| || | ||| | |||||| |||| | | || | |||| || || | Sbjct 788 AAATCCAGCGTAATGACCACTGAGCTTTTCGCTTGACACATGGCAATGTTTCGATTGCAT 847 Query 39364 TAAATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACA 39423 ||||||| ||||||| Sbjct 848 TAAATAAAAGCAAACGTTGTTCGTTGCAATCAATGTATGTTTGCAAAAGCATGGAATACA 907 Query 39424 TTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAAT 39483 |||| ||||| ||| ||| || || ||||||||| |||||| | |||||||| | Sbjct 908 TTTCTGAATGCACATTTTCAATGGCAATTTGAAATCCATAAAAACAACGTGCTTCTGTAA 967 Query 39484 ACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTG 39543 |||||| || | |||||||| | | ||| ||| ||||| |||||| ||| | Sbjct 968 CCTGAACCTCTCGTATAAATCGTTCTGCGAGATTTTCATTAACAATTCCATCACTTGCGG 1027 Query 39544 CGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCC 39600 | || ||||| | || |||| | |||| ||| |||| | || || || | || Sbjct 1028 CAAAAAATGCGAGAATATATGATAAAAAACGTTGCTCATCCGCGTTCAATTTGTTATTCC 1087 Query 39601 AAGATTCAA---GATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGG 39657 || |||| |||| | | ||| || || |||| ||||||||| || ||| | Sbjct 1088 AA---TCAAATCGATCACGTCCAAGATCAACCTCCTCTACTGTCCAAAACGAAGCTTGAG 1144 Query 39658 ATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAG 39717 |||||||||||||||| ||| ||| ||| ||||| ||||| | ||| | || Sbjct 1145 ATTTTTTATACATTTGCCATAAATCGTAATACTCAATTGGAAACACAACAAAACGCGAGA 1204 Query 39718 TAtttttttCTAATATCGGTTC 39739 |||||| || || || ||||| Sbjct 1205 TATTTTCTTTTAGCATTGGTTC 1226 >seq100917 Length=15418 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || ||||| || || | || | ||| | || | |||||| || || ||||| | Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || || ||||| ||||| || || || | ||| || ||||| || Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || || || || || || || || || ||||| || || || |||| || ||| Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || || |||||||| | ||| || | ||||||||||||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903987099561000