Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq68182 107 6e-18
seq67252 96.9 1e-14
>seq68182
Length=3400
Score = 107 bits (118), Expect = 6e-18
Identities = 224/330 (68%), Gaps = 4/330 (1%)
Strand=Plus/Plus
Query 289016 CGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTT 289075
||| ||| ||| | || || ||||| |||||||| || || | | |||||| | || |
Sbjct 1476 CGCCCCTCTTTCTGCCGACCGCATCGATTTCGTCGATAAATAGAATACACGGCGCGTTCT 1535
Query 289076 GTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTA 289135
|| || | || || | ||||| || | || | || | || ||| ||||||| |
Sbjct 1536 TTCGTGCGGTGGCGAACATGTCTCTCACTCTCGACGGACCGACGCCGACAAACATTTCGA 1595
Query 289136 CAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCG 289195
||| || || | || ||| ||||| | || |||||||| || || || |||
Sbjct 1596 GAAACTCGGAGCCCGACACTGTGATGAACGGAACGTTTGCTTCACCAGCAGTGGCTTTCG 1655
Query 289196 CCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTG 289255
|||||||||| || || ||||| || || ||| || ||| |||| ||||| | |||||
Sbjct 1656 CCAGAAGTGTTTTGCCAGTTCCTGGCGGACCCGTTAGTAGCGCTCCTTTTGGGATTTTTG 1715
Query 289256 C-CCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTC 289313
| |||| | || ||||| | |||| | |||||||| | || | |||| | ||
Sbjct 1716 CTCCCA--AATCTAAATATTGTTGAGGGTTTTTTAAAAAATTCACGAATTCCATTATCTC 1773
Query 289314 ATATTTTGCCTCATCACATCCTGCTACATC 289343
||||| || |||||||| || |||||
Sbjct 1774 CAGCTTTGCTTCTTCACATCCGGCAACATC 1803
>seq67252
Length=1665
Score = 96.9 bits (106), Expect = 1e-14
Identities = 304/461 (66%), Gaps = 14/461 (3%)
Strand=Plus/Minus
Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262
|||||| ||| ||| ||||| ||| | || |||||||| | ||||| || || ||
Sbjct 1230 ATGAAAGACACTTTTTTTCTTATATTCTCGCTTTTTTTGCAACAAGTGACGGAATAGTCA 1171
Query 133263 TTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTT 133322
|||||||| | | | | ||| | | || |||||| | ||||| | ||| |
Sbjct 1170 ACGAAAATTTGGCAGAAAGATTTTTATGTGATGTTCAAATTAGTGAAGCAAGATGCTTCT 1111
Query 133323 ATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTA--ATTG- 133379
|||| | || ||||| | |||||||| || || | || | | | | || ||||
Sbjct 1110 ATGGTTTGCAAATTGCAGTTGAAAATATACACTCAG--AAATGTAC-AGTTTATTATTGT 1054
Query 133380 ATACTTACATCAAAGATACCGTCCAGAAGCACAA-AC--TATTCAACGCCATTAGCGAAT 133436
|||| ||| ||||||| | | || || || || || | || | || |
Sbjct 1053 ATACACTCATTAAAGATAAAG---ATAAACAAAATACCTTAATAAATTCAATCCATAATA 997
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
|| ||| |||||||| ||| | || ||||| | |||||||| | || || | || |
Sbjct 996 TTAGTTGCATTAAAAAAAAAGCCGAATGGGCATTAAAATGGATAAATGAAAAACATGTTA 937
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
| |||| | ||||| || ||||||| || || || |||||||| |||||| | |
Sbjct 936 GCTTTGGAGAGAGACTCGTGGCATTTGCTGCTGTTGAAGGAATTTTTTTTAGTGGTTCAT 877
Query 133557 TCTGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615
| |||| |||||| |||| | ||| | ||||| ||| || ||| | ||||
Sbjct 876 T-TGCTGCTATTTATTGGATAAAAGAACGTGGAATTTTAAATGGTTTAACGCAAAGTAAC 818
Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656
|||||||||||||| || || | |||||| || |||||
Sbjct 817 GAACTTATTTCAAGAGATGAAGGCCTTCACTGTGATTTTGC 777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1469902698610665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |