Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq100917 98.7 9e-16 seq94648 87.8 2e-12 seq95739 82.4 7e-11 >seq100917 Length=15418 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || ||||| || || ||||||||||| || | | Sbjct 7560 ATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCGTCG 7619 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| ||||| Sbjct 7620 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 7679 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || || || |||||| | || || |||| | ||||| ||| Sbjct 7680 CAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTACAAC 7739 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || || || |||||||| || ||||| |||| || | || |||| Sbjct 7740 ATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGGCG 7788 >seq94648 Length=7301 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || | | || |||||||||||| | || || ||| | || Sbjct 5292 ATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGACA 5233 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| || || |||||| |||||| || ||||| | || ||| || || Sbjct 5232 GACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCAG 5173 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881 ||| | |||| |||| ||| ||||| ||||| || ||| | | | | ||||||| Sbjct 5172 CAAAGACTGATATTTGGCGGCAAACAACTGGAAGA--CGAACGAGTTTTAAGCGATTATA 5115 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 || | || || || |||||||| ||||| || Sbjct 5114 ACGTACAGAAAGAGTCGACACTTCACTTAGT 5084 >seq95739 Length=7868 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAG-GG 126104 || ||||| | |||||| ||| |||||||| || |||| || || |||| | || Sbjct 740 GTCGAAGGTATATTTTTCAGTGGTTCCTTTGCGGCCATATTTTGGATCAA-ACAACGTGG 682 Query 126105 TATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATAC 126164 |||| || | ||| | || || ||||| || || || |||||||| |||||||| || Sbjct 681 TATACTGTCTGGTTTGACTTTTAGCAATGAATTAATCTCTCGTGATGAAGGACTACACTG 622 Query 126165 GGACTTTGCATGTCT-GTATT 126184 |||||||||||||| ||||| Sbjct 621 TGACTTTGCATGTCTAGTATT 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449326539352600