Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq72212 102 1e-16
seq72211 102 1e-16
seq86681 98.7 1e-15
seq72213 98.7 1e-15
>seq72212
Length=11577
Score = 102 bits (112), Expect = 1e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 8718 CCCGACGAGGAGCA 8731
|||| || ||||||
Sbjct 61 CCCGCCGGGGAGCA 74
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 61 CCCGCCGGGGAG 72
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 72 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 13
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 12 TACTACCGAGGA 1
>seq72211
Length=440
Score = 102 bits (112), Expect = 1e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 8718 CCCGACGAGGAGCA 8731
|||| || ||||||
Sbjct 61 CCCGCCGGGGAGCA 74
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 61 CCCGCCGGGGAG 72
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 72 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 13
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 12 TACTACCGAGGA 1
>seq86681
Length=5981
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1351 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1292
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1291 CCCGCCGGGGAG 1280
Score = 96.9 bits (106), Expect = 5e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 11724 ACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782
||| |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||
Sbjct 1357 ACCGAGTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 1298
Query 11783 CGATTCCCCGACGAGGAG 11800
|||||||||| || ||||
Sbjct 1297 CGATTCCCCGCCGGGGAG 1280
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
|||||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||
Sbjct 1278 AACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 1337
Query 139411 TATACTAACGAGGA 139424
||||||| ||||||
Sbjct 1338 TATACTACCGAGGA 1351
>seq72213
Length=1366
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 61 CCCGCCGGGGAG 72
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
|||||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||
Sbjct 74 AACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 15
Query 139411 TATACTAACGAGGA 139424
||||||| ||||||
Sbjct 14 TATACTACCGAGGA 1
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 61 CCCGCCGGGGAG 72
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652016135934800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |