Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq72717 131 4e-25
seq5419 93.3 1e-13
seq98540 89.7 1e-12
>seq72717
Length=3270
Score = 131 bits (144), Expect = 4e-25
Identities = 550/859 (64%), Gaps = 11/859 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||||| ||| ||||| |||||||| | | | | | | |||
Sbjct 1347 TATTTTGGTTTCAGAACACTTGAGAAATCTTATTTATTAAAAATTGAAAACAAAGTAATT 1288
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| || ||||||| | | | ||| | | || |||||| |||||||| |
Sbjct 1287 GAACGTCCACAGCACATGTATATGAGAGTTTCTTTAGGAATTCATTCTGATGATATTGAT 1228
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAG--CTATTCATGCTACTCCTA 110481
|| || | || || | || || || |||| | | ||||||| || | || |
Sbjct 1227 GCAGTCTTGCAAACGTA-CAACTA-TATGTCAAAAAACTGGTTTATTCATTCTTCACCAA 1170
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541
| || | ||||||||||| | | | |||| || | ||| ||||| || |||
Sbjct 1169 CGTTAATGAACGCAGGAACAATTTGTCCACAAATGTCAAGTTGTTTTCTATTAACAATGC 1110
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA-CTGCTCTTATTTCTAAA 110600
| || ||| | ||||||| |||| | | || ||| | ||| ||| || | |||
Sbjct 1109 ATGAAGATAGTGTTGAAGGAATTTTTAAGACT-TTATATAAATGTGCAAAAATAGCGAAA 1051
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| ||||| |||||||| | | | || | |||| | || || ||||||| ||
Sbjct 1050 CATTCTGGTGGAATTGGGCTCAATATACACAAAGTTCGTTGTAATGGTACAAATATTGCT 991
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
| | ||| |||| ||| | || |||||| | || || | ||| |||| ||
Sbjct 990 TGTACTAGTAGTGTATCAAACGGAATAGTGCCAATGATCAGGGTTTACAATAACACAGCG 931
Query 110721 AAATATGT-GAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACC 110776
|| | | |||||| |||| || | || ||| | ||| | || ||| | ||| |
Sbjct 930 CGATTTTTCAAATCAA-GTGGAAACAATAAGCCAGGCGCGTTTACAATTTATGTAGAAAC 872
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
|||||| |||| ||||| || || | || | |||||| || || ||||
Sbjct 871 ATGGCATGCAGAAATATTCGAGTTTCTTGAGTTGAAAAAAAATTTTGGTGCAGAGGAACT 812
Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
|||||| | ||| | |||||||| | |||||| |||||||||| ||| || |||
Sbjct 811 AAGAGCGAGAGATCTTTTTTATGCCTTATGGATTCCAGATTTATTTATGCGTCGAGTTTT 752
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956
|| ||| |||||| | ||||| ||||||| | ||| ||| || || | |
Sbjct 751 TGAGAATCAATATTGGTCTTTAATGTGCCCTCATCAATGTCCAGGTTTAGAAGACATTTG 692
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACA 111016
|| | |||||||| | ||||| ||||| |||||| || || | || ||| |
Sbjct 691 GGGTGATGAGTTTGACAAGCTTTATGAAAATTATGAAGAAAAAAAAATGTACACTAAAAA 632
Query 111017 AATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076
| || ||| || |||||||| || | ||||| |||| ||||| || | |||
Sbjct 631 AGTTAAAGCAATTGATCTTTGGTTTCTTATTATAGAATCCCAAGCAGAAACAGGTAATCC 572
Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136
| ||| | || |||||| |||| ||| | || |||| ||| | || |||||
Sbjct 571 ATTTATGCTTTACAAAGATAGCTGCAATCAAAAAACAAACCAAAAAAATATTGGCACAAT 512
Query 111137 TAAGTCTAGTAATTTGTGC 111155
||| | | | ||||| |||
Sbjct 511 TAAATGTGGAAATTTATGC 493
>seq5419
Length=656
Score = 93.3 bits (102), Expect = 1e-13
Identities = 132/185 (71%), Gaps = 3/185 (2%)
Strand=Plus/Plus
Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735
|||| |||| |||||||||||||| | || |||||| | ||||||| ||| | ||||
Sbjct 467 TCAAATGGAATTGTTCCAATGTTACGTGTTTTCAACAATACTGCAAGATACATTGATCAT 526
Query 110736 GGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792
|| || || ||| ||| || | || || | | | ||| | |||||| ||||||||
Sbjct 527 GGAGGAAAAAAAAGACCTGGAGCAATGGCAATTTTTGTTGAAACATGGCATGCAGATATA 586
Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852
|| ||||| ||||| | |||||| | || |||||| | | | || | ||||||
Sbjct 587 TTGGAATTTCTAGAATTAAAAAAAAATAATGGTCCTGAAGAGCTACGTGCTAGAGATTTA 646
Query 110853 TTTTA 110857
|||||
Sbjct 647 TTTTA 651
>seq98540
Length=1769
Score = 89.7 bits (98), Expect = 1e-12
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCTCAA 304948
||||| ||| | || || || | |||||||| ||| |||| || | |||| |||
Sbjct 1161 CAATACCATGTGGCGACGTTTGTTGATAATGACATTCCTGGCATACCGAAGGCTCAGCAA 1102
Query 304949 AGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATT 305008
| |||||| |||| | || ||||| || | | ||| ||||||||||| |||
Sbjct 1101 AAGTCTGGCCGACCGCTCAAATCTATTAAACAGAGATTGAAATCGAAAGAGGGTCGGATT 1042
Query 305009 CGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGAT 305068
|| |||||||| ||||| ||| | ||||||||| || ||| ||| || ||||| |||
Sbjct 1041 CGTGGTAATCTTATGGGTAAAAGAGTTGATTTTTCCGCTCGAACTGTTATTACACCCGAT 982
Query 305069 TCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100
|| || ||| || | |||| | || |||||
Sbjct 981 CCT-AATTTACGTATCGATGAGGTCGGCGTTCC 950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1185268702769745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |