Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq94648 93.3 4e-14 seq100917 84.2 2e-11 >seq94648 Length=7301 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || ||||| | || ||| | || ||| | || || ||| | | Sbjct 5292 ATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGACA 5233 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || | | | | | ||||| ||| ||| ||||||||||| | || || || ||| Sbjct 5232 GACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCAG 5173 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| || | |||||||||||||| ||||| || || | | |||||||| || Sbjct 5172 CAAAGACTGATATTTGGCGGCAAACAACTGGAAGACGAACGAGTTTTAAGCGATTATAAC 5113 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 | || ||||| || || |||| ||||| Sbjct 5112 GTACAGAAAGAGTCGACACTTCACTTAGT 5084 >seq100917 Length=15418 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| ||||| | || || || ||| | || || || | |||||| ||||||| || | Sbjct 7555 ACAAAATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGA-G 7613 Query 25230 CCAACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCC 25288 || || | || |||||| | || || || ||| || || ||||| || || || Sbjct 7614 CCGTCGGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCT 7673 Query 25289 GATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGAT 25348 |||||||| | | || | || |||||||| | ||||| | |||| | |||||| Sbjct 7674 GATCAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGAT 7733 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || || ||||| || || ||||| | ||| | | ||||||| || Sbjct 7734 TACAACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGG 7786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444529436114400