Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq100917 116 4e-21 seq94721 100 3e-16 >seq100917 Length=15418 Score = 116 bits (128), Expect = 4e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| ||| || || || || || || || || |||||||| |||| Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | ||||||||| || || ||||| ||||||||||| || || Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || || || || | ||||| |||| ||||| Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 ||||| || || || ||||| || | || || ||||| || |||||||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTGT 7555 >seq94721 Length=6748 Score = 100 bits (110), Expect = 3e-16 Identities = 403/631 (64%), Gaps = 8/631 (1%) Strand=Plus/Minus Query 8338 AATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTA 8397 ||| ||||| | ||||| || ||||| | || ||||| | || ||||||||| || Sbjct 2223 AATTTGTGCACAGAAATAGTGGAGTACTCTTCTCCAGACGAGATCGCTGTTTGCAATTTA 2164 Query 8398 GCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAA 8457 |||||| | | | ||| || ||| || | || | ||||||| | |||| || Sbjct 2163 GCGTCGATTGCTCTCAACAGATTTGTTAATAAAAGCGAACGCACTTACAATTTTGCGAAA 2104 Query 8458 TTGAAAAACGCCGTGCAAGTGA---CGGTACGCAATTTAGATCGCATCATTGATGTCAAT 8514 | ||| | | | || | | | || ||| || || || |||||| | ||| Sbjct 2103 CTCAAAGAAGTCACTAAAATAATCACTTTA---AATCTAAATAAAATAATTGATATTAAT 2047 Query 8515 TTTTATCCCTTGGAAGAAGCGCGCGT-ATCGAACATGCGCCACAGACCCGTTGGCGTGGG 8573 | ||||| ||| || | || || ||| |||| | || |||| | || | || Sbjct 2046 TACTATCCGTTGCCTCAAAC-CGAGTTATCAAACAAAAGACATCGACCAATAGGTATTGG 1988 Query 8574 CGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGC 8633 |||||||| |||| ||||| ||| | |||| | || | || |||| | ||| | Sbjct 1987 TGTGCAAGGATTGGCTGACGCTTTTATTCTAATGCGTATGCCATTCGGAAGCGATGAATC 1928 Query 8634 GCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTG 8693 ||| | || ||||| ||||| |||||| | ||||||||||| | ||||| || || Sbjct 1927 GCGTAAACTTAACATTCAAATATTTGAAACGATATATTACGGCGCTCTGGAAGCGAGTTG 1868 Query 8694 TCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGG 8753 || | || | | | ||||| ||||||| ||||||| || || | | || Sbjct 1867 CGAATTGGCTCAAAAGTTGGGTCCGTACGAGACGTACGCTGGTTCGCCAGTTTCCAAAGG 1808 Query 8754 AATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTT 8813 || | || | ||| |||||| || ||||| | ||| ||||||||| ||| || Sbjct 1807 TATTCTTCAGTTCGATATGTGGGATAAAACGCCATCTGATTTATGGAATTGGCCCGAATT 1748 Query 8814 GAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCAC 8873 || | ||||| || ||| || | | ||| | || |||||| ||||| || Sbjct 1747 GAGGCAAAAAATAGCGAAATATGGCGTTAGGAATAGTTTATTAGTGGCTCCGATGCCAAC 1688 Query 8874 CGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGT 8933 || | || || || ||| |||| ||||| || || ||||| | | || | || | Sbjct 1687 TGCTTCCACAGCGCAGATATTGGGTAACAATGAGTCGATTGAGGCTTATACTAGTAATAT 1628 Query 8934 GTACGTGAGACGAGTGTTGGCCGGCGATTTT 8964 ||| | || ||||| | |||| || ||| Sbjct 1627 ATACTCGCGAAGAGTGCTTTCCGGTGAATTT 1597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504756891493400