Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq95739 298 4e-76 seq96803 277 1e-69 seq67252 152 4e-32 seq92730 122 7e-23 seq77187 104 2e-17 >seq95739 Length=7868 Score = 298 bits (330), Expect = 4e-76 Identities = 635/928 (68%), Gaps = 60/928 (6%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | ||||||| || | ||||| |||||||||||| | ||| | || |||||| Sbjct 1219 TGCTAAAAGAAAATATCTCGCGTTTTGTTGTGTTTCCAATTGAGTATTACGATTTATGGC 1160 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGAT-TTGACTAAA 43795 ||||||| |||||| | || || || |||||||||| ||| || |||||| ||| Sbjct 1159 AAATGTATAAAAAATCTCAAGCTTCGTTTTGGACAGTAGAGGAGGTTGATCTTG------ 1106 Query 43796 GACTTAGCACATTGGATTGCATTAA-------AAC-CACAAGAAAAACATTTTATATCTT 43847 ||| | ||| ||||| | ||| ||| | | || ||| |||| |||| | Sbjct 1105 GACGTGATCGATTTGATTGGAATAACAAATTGAACGCGGATGAGCAACGTTTTTTATCAT 1046 Query 43848 TGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGT 43907 || | || |||||||| || || || || || || ||||||||| | | || | Sbjct 1045 ATATTCTCGCATTTTTTGCCGCAAGTGATGGAATTGTTAATGAAAATCTCGCAGAACGAT 986 Query 43908 TTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAG 43967 || | ||| ||||| | |||||||||| ||||||||||| |||||||||||||| | Sbjct 985 TTATACGAGAGGTTCAGGTTACAGAAGCACGTTGTTTTTATGGATTTCAAATTGCCATTG 926 Query 43968 AAAATATTCATTCGGAAATGTA---CAGTCTTCTGATAGATACGTACATCAAAGATGGGC 44024 ||||| | ||||| |||||||| || ||| || | || ||||| ||| | Sbjct 925 AAAATGTGCATTCAGAAATGTATTCCATGCTTTTGCAA---ACATACATT---GATTGCA 872 Query 44025 ACGAGAAGCAT---CGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAA 44080 |||| | | | | || |||||||| || |||||| | || || | | || | ||| Sbjct 871 ACGAACAACGTTTGCTTTTATTTAATGCAATCGAAACATTGCCATGTG-TCAAGCGAAAA 813 Query 44081 GCAGACTGGGCCCTTAAATGGATAAATTCAAAT------GATTCTTTTGGAGAACGACTT 44134 || | ||| | | ||||| ||||| | ||||| ||| ||||| | Sbjct 812 GCTCAGTGGTCATTACGCTGGAT---TTCAAGTAGTACAGATTCGTTTTCTGAACGTTTA 756 Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GATCGTTTGCGGCCATATTTT 44192 || || ||||| | ||| ||||| || || |||||| | || |||||||||||||||| Sbjct 755 GTTGCATTTGCTGCTGTCGAAGGTATATT--TTTCAGTGGTTCCTTTGCGGCCATATTTT 698 Query 44193 GGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTG 44252 || | || |||| ||| | || |||| ||||| ||| ||||| ||||| ||||| Sbjct 697 GGATCAAACAACGTGGTATACTGTCTGGTTTGACTTTTAGCAATGAATTAATCTCTCGTG 638 Query 44253 ATGAAGGCTTACATTGCGATTTTGCTTG-CT--TGTTACTTGGATATCTAGGAGACGATA 44309 ||||||| |||| || || ||||| || || | || | | ||||| | | | | | Sbjct 637 ATGAAGGACTACACTGTGACTTTGCATGTCTAGTATTTCGTCGATATATCCG---CTACA 581 Query 44310 AGCCT--TCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGA 44367 | ||| || | ||| ||||| || ||| || ||| || || || |||||||| Sbjct 580 AACCTAGCCAAG--AGAAAATTAGCGAAATTATTCGAGAAGCCGTTTTAATTGAACAAGA 523 Query 44368 ATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATGAACC 44426 |||| | | |||||||| || |||||| || ||||| || | || ||||| | Sbjct 522 ATTTCTAATTGATGCATTACCAGTTTCTTTAATCGGCATGAATTGTTCGCTT-ATGAAAC 464 Query 44427 AATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG-CGATAAACACTAT 44485 | || ||||||| |||| ||| | ||| | ||| ||| || | | ||| ||| Sbjct 463 AGTACATTGAATTTGTTGCCGATAAGCTTCTTATTGAATTGGAATGTCCAAAAA---TAT 407 Query 44486 ATT--GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACT 44543 || || |||| || |||||||||||||| ||||||| |||||||| |||| || | Sbjct 406 TTTGCGTGGAAAATCCATTTGATTTTATGGAGCATATTTCATTGGAAGGAAAAAGCAATT 347 Query 44544 TTTTTGAAAAACGCGTTGGAGAATATCA 44571 |||| |||||| |||||||| ||||| Sbjct 346 TTTTCGAAAAAAAAGTTGGAGAGTATCA 319 >seq96803 Length=7468 Score = 277 bits (306), Expect = 1e-69 Identities = 619/913 (68%), Gaps = 30/913 (3%) Strand=Plus/Plus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| ||||||||| | | ||||| ||||||||| | ||||| | || |||||| Sbjct 3239 TGCTAACAGAAAATGTCACGCGTTTTGTGGTGTTTCCAGTAGAATATTACGATTTATGGC 3298 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTT--GACTAA 43794 |||||||||||||||| || || ||||||||||||| ||| ||||||||||| ||| Sbjct 3299 AAATGTACAAAAAAGCTCAAGCTTCATTTTGGACAGTAGAGGAAGTTGATTTAGGAC--G 3356 Query 43795 AGACTTAGCACATTGGAT---TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGT 43851 || || ||||||| | |||||| || | ||| || ||| |||| | | Sbjct 3357 TGATCGTGCTGATTGGATCAATAAATTAAACCCGGATGAACGACGTTTCTTATCGTATAT 3416 Query 43852 TTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGC 43911 | | || |||||||| || || || || | || ||||||||| | | | || ||| Sbjct 3417 TCTTGCATTTTTTGCCGCTAGTGATGGAGTTGTTAATGAAAATCTTGCTGAACGATTTAT 3476 Query 43912 GCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 | ||| ||||| | |||||||||| || |||||||| ||||||||||| || || || Sbjct 3477 ACGAGAGGTTCAGGTTACAGAAGCACGTTGCTTTTATGGATTTCAAATTGCGATTGAGAA 3536 Query 43972 TATTCATTCGGAAATGTA--CAGT-CTTCTGATAGATACGTACATCAAAGATGGGCACGA 44028 | | ||||| |||||||| || | ||| || | ||||| || | || | || Sbjct 3537 TGTGCATTCAGAAATGTATTCATTACTTTTG---CAAACGTATATTGATGACAAAAAAGA 3593 Query 44029 GAAGCAT-CGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGAC 44086 ||| || | || |||||||| || ||||| |||| || | | || | || ||| | Sbjct 3594 -AAGAATGCTTTTATTTAATGCAATTGAAACGATACCATGTG-TCAAGAAAAAGGCACAA 3651 Query 44087 TGGGCCCTTAAATGGATAAATTCAAAT------GATTCTTTTGGAGAACGACTTGTCGCG 44140 ||||| | ||||| ||| ||| | |||||||| ||||| | || || Sbjct 3652 TGGGCATTACGCTGGAT---TTCTAATAATTTAGCTTCTTTTGCTGAACGTTTAGTTGCA 3708 Query 44141 TTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAG 44200 || || | ||| ||||| || || ||| || |||||||| | ||||||||| | || Sbjct 3709 TTCGCTGCTGTTGAAGGGATATTTTTTAGTGGTTCGTTTGCATCTATATTTTGGATTAAA 3768 Query 44201 AAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGC 44260 |||| || | | | ||| ||||| ||| ||||| |||| |||||||||||| Sbjct 3769 CAACGCGGAATATTACGTGGTTTGACTTTTAGCAATGAACTAATTTCTCGTGATGAAGGA 3828 Query 44261 TTACATTGCGATTTTGCTTGCTTGTTACTTGGA-TATCTAGGAGACGATAAGCCTTCATG 44319 |||||||| |||||||| || | || || || || | | | | || || Sbjct 3829 TTACATTGTGATTTTGCATGTCTAGTATTTCGACGATACATTCG-CAACAAACCGAGCGA 3887 Query 44320 TAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAAC 44379 | | ||| || ||| || ||| || || || |||||||||||| | Sbjct 3888 GGATAAAATAGTCGAAATTATTCGAGAAGCCGTTTTAATTGAACAAGAATTTCTAGTGGA 3947 Query 44380 AGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATA 44439 || | || || |||||| || |||||| | ||||| || || |||||||| Sbjct 3948 TGCTCTGCCAGTTCGTTTAATTGGCATGAATTGCTCACTCATGAAACAGTACATTGAATA 4007 Query 44440 CATTGCAGATCGTTTACTTTTGGAACTGGGTTG-CGATAAACACTATATTGTACAAAACC 44498 | |||| ||| | || ||||| | | ||| | | ||| | | | | |||||| Sbjct 4008 CGTTGCTGATAAACTTCTCATGGAATTAGATTGTCCAAAAATATTTCAGT-CGGAAAACC 4066 Query 44499 CGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCG 44558 | |||||||||||||| | ||||| |||||||| |||| || ||||| |||||||| | Sbjct 4067 CTTTTGATTTTATGGAGCAAATTTCATTGGAAGGAAAAAGTAATTTTTTCGAAAAACGAG 4126 Query 44559 TTGGAGAATATCA 44571 ||||||||||||| Sbjct 4127 TTGGAGAATATCA 4139 >seq67252 Length=1665 Score = 152 bits (168), Expect = 4e-32 Identities = 333/486 (69%), Gaps = 17/486 (3%) Strand=Plus/Minus Query 43733 TGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACT 43792 ||| | ||||| |||||||| ||| | | ||||| | |||||||| |||||| Sbjct 1324 TGGAATATGTATAAAAAAGCTTTGGCTTGTATATGGACTGTGGAAGAAGTAGATTTGGGA 1265 Query 43793 AAAGACTTAGCAC-ATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTTGG 43850 ||||| ||| | ||||| || | | || | || |||| ||| ||| | |||| Sbjct 1264 AAAGA-TTACAATGATTGG-TTACTTCTAAGTGAAAATGAAAGACACTTTTTTTCTTATA 1207 Query 43851 TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTG 43910 || | || |||||||| | || ||||| |||||||| |||||||||| | ||| Sbjct 1206 TTCTCGCTTTTTTTGCAACAAGTGACGGAATAGTCAACGAAAATTTGGCAGAAAGATTTT 1147 Query 43911 CGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAA 43970 || |||||| | |||||| |||| || ||||| || |||||||| | |||| Sbjct 1146 TATGTGATGTTCAAATTAGTGAAGCAAGATGCTTCTATGGTTTGCAAATTGCAGTTGAAA 1087 Query 43971 ATATTCATTCGGAAATGTACAGTCTTCTGATAG-ATACGTACATCAAAGATGGGCACGAG 44029 |||| || || |||||||||||| || | || | |||| ||| |||||| | || Sbjct 1086 ATATACACTCAGAAATGTACAGT-TTATTATTGTATACACTCATTAAAGAT---AAAGAT 1031 Query 44030 AAGC---ATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACATAAAGCAGA 44085 || | || || | ||| | || | || | || ||| |||||| | ||||| || Sbjct 1030 AAACAAAATACCTTAATAAATTCAATCCATAATATTAGTTGC-ATTAAAAAAAAAGCCGA 972 Query 44086 CTGGGCCCTTAAATGGATAAATTCAA---ATGATTCTTTTGGAGAACGACTTGTCGCGTT 44142 ||||| | |||||||||||| || ||| | |||||||| |||| || || || Sbjct 971 ATGGGCATTAAAATGGATAAATGAAAAACATGTTAGCTTTGGAGAGAGACTCGTGGCATT 912 Query 44143 TGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAA 44202 ||| | ||| ||||| ||||| ||| || || ||||| || || | |||| |||| | Sbjct 911 TGCTGCTGTTGAAGGAATTTTTTTTAGTGGTTCATTTGCTGCTATTTATTGGATAAAAGA 852 Query 44203 ACGAGG 44208 ||| || Sbjct 851 ACGTGG 846 >seq92730 Length=2927 Score = 122 bits (134), Expect = 7e-23 Identities = 232/340 (68%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 19601 CTGGTGTAANTGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTG 19660 ||||| | ||| || || ||||||||||| || ||| | ||| | ||| | || || | Sbjct 1267 CTGGTAATACTGGTGTTCACGACACTGTTGTTAACCAATTACTGGCGAAAATCGATGGCG 1208 Query 19661 TTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGAC- 19719 | | || || || ||| | |||||||| ||||| ||||||| || | |||||| Sbjct 1207 TAGAATCGCTAAACAACATTCTTGTTATTGGAATGACAAATAGACACGACATGATAGACG 1148 Query 19720 -AGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGA 19778 ||||| ||||||| ||||| || |||| | |||| ||||||| ||||| || || Sbjct 1147 AAGCGC--TATTACGTCCCGGACGTCTGGAGGTGCAGATGGAAATTAGTTTACCGGACGA 1090 Query 19779 ATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838 | || | || | ||| | || || ||||| |||| ||||| ||| || || Sbjct 1089 GTTCGGTAGGGTTCAGATTCTTAATATTCATACCTCAAAGATGCGTCAATTCAAAAAATT 1030 Query 19839 AAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGA 19898 || ||||| ||| | | ||| | || | |||||||||| | |||||||| Sbjct 1029 GGGCGATGATGTCGATATCAACGAACTCGCGTCTATAACCAAAAACTTTTCGGGCGCAGA 970 Query 19899 ACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 | | ||||| | || ||||| || ||||| | ||||||| Sbjct 969 AATAGAGGGTCTTGTAAGGGCAGCGCAATCGACTGCAATG 930 Score = 98.7 bits (108), Expect = 8e-16 Identities = 263/398 (66%), Gaps = 8/398 (2%) Strand=Plus/Minus Query 19216 CCAAATTGGAATGT-GAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAAT 19274 ||||| ||| || | || || ||| ||| |||||| || ||||| ||| | || Sbjct 1720 CCAAACTGGGATTTCGAGAGT-ATGGGAATCGGAGGACTGGACAAAGAATTTAACGCCAT 1662 Query 19275 CTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATG 19334 ||||| |||| |||| || | |||||| | | || | || |||| || || | Sbjct 1661 ATTTCGACGAGCGTTTGCTTCCAGAGTTTTTCCACCGGAAATAATCGAACAGTTAGGTTT 1602 Query 19335 TAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGC 19394 |||||||| || ||| || || | | ||| || || || ||| ||||||||||| || Sbjct 1601 GAAACATGTGCGCGGAATTCTGTTATTTGGTCCGCCAGGAACTGGTAAAACATTAATGGC 1542 Query 19395 GAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGA 19451 | || || | || | | | | ||| | | ||| || || || ||||| || | Sbjct 1541 GCGACAAATCGGTCAGATGTTGAACGCAAGAGAGCCT---AAGATAGTGAATGGCCCGCA 1485 Query 19452 AATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGC 19511 || || |||||||||| || ||||||| | ||| || || || || |||||||| Sbjct 1484 GATTTTGGATAAATATGTTGGCGAATCGGAGGCTAATATAAGAAAATTATTCGCTGACGC 1425 Query 19512 TGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGA 19571 |||||||| | ||| | | || || || | || || |||||| | ||||| Sbjct 1424 GGAAGAAGAGGAGAAAAGGATGGGAAATAATAGCGGACTTCATATAATAATATTCGATGA 1365 Query 19572 ATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTAA 19609 | | || || || || || ||||||||||| |||| Sbjct 1364 AATCGATGCCATTTGCAAAGCAAGAGGTTCTGTGGTAA 1327 >seq77187 Length=4015 Score = 104 bits (114), Expect = 2e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 |||||||||||| ||||||| |||||||| ||||||||||| || |||||||| ||||| Sbjct 1610 AGAAAATCCGTCGCGGTTTGTAGTGTTTCCTATTCAATATCACGATATATGGCAGATGTA 1669 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGA 43785 || ||||| |||| || || ||||||| ||||| || || Sbjct 1670 TAAGAAAGCTGAGGCATCGTTCTGGACAGTGGAAGAGGTGGA 1711 Score = 102 bits (112), Expect = 6e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 43915 AGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATAT 43974 |||||||||| || ||||||| || ||||||||||| |||||||| ||||| |||||| | Sbjct 2624 AGAAGTTCAAGTAACAGAAGCGCGTTGTTTTTATGGCTTTCAAATCGCCATCGAAAATGT 2683 Query 43975 TCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 ||||||||| ||||| || | || || | || |||||| | ||| || Sbjct 2684 TCATTCGGAGATGTATAGCTTGCTTATTAACACATACATCCACGATAGG 2732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396964116527725