Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5134 114 1e-20
seq40065 93.3 4e-14
seq94648 82.4 6e-11
>seq5134
Length=269
Score = 114 bits (126), Expect = 1e-20
Identities = 177/252 (70%), Gaps = 3/252 (1%)
Strand=Plus/Minus
Query 130732 AAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAAC 130791
||||||||| | | || ||||| |||||||| | |||||| || || ||||
Sbjct 261 AAGATCTTTAATTAGATATGGATTAACCATTTGAAACTGACCAGCTAGTACTTGTCTTGT 202
Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851
|||||| || ||||| |||||||||||||| ||||| || || | || |||||||| ||
Sbjct 201 GTAAATATTACTCGTAAACGGTTCAAAGGACTCGTTATTACCAAGTAACTGTGCTGTGGT 142
Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911
||| || ||||| |||| || | | || || || | | | | | ||| ||
Sbjct 141 TGCAGTCGGCATTAATGCTACAAGTTGACTGTTTCGCAACTTATACTTTGATATTCTTTC 82
Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971
||| | || | |||||| |||||| | |||| | || | ||||| |||||||||
Sbjct 81 CTTTAGTTTACCCCAATTCCATAGTTTTGAAGGTGT---TTTTTCCCACAAATCAAATTG 25
Query 130972 TAGTATGCCTTT 130983
||||| ||||||
Sbjct 24 TAGTAAGCCTTT 13
>seq40065
Length=761
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | || |||||| | || | | || || || || |||||||||||
Sbjct 564 ACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAATCACTGATAACTCGCTCGTCTTCC 505
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| ||||| ||||| | || || | ||||| || |||| ||||||||||||||
Sbjct 504 AGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTCAACAGGCAAACCCTCTTTATCGGTA 445
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | || ||||||||||| | ||| || |||| || || | ||||
Sbjct 444 ATCTTCGACTTAACCACTTGAACAGTGTCTGTCGGTTCCACGTCTAACGTAATTGTTTTG 385
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| || ||||| || || |||||
Sbjct 384 CCATTCAGTGTCTTCACGAATATATGCAT 356
>seq94648
Length=7301
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||||||||| |||||||| | || | || ||||| | | | ||||||||
Sbjct 2485 ACCAGATGTAACGTCGAGTCTTTCTTTATTTCATAATCGCTTAAAATCCTTTCGTCTTCC 2544
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||||| |||||||| || || | ||| || | |||||||||||| | || ||
Sbjct 2545 AATTGTTTGCCGGCGTATATCAGTCTCTGCATGTCTGCAGGCACACCCTCTCTCTCAGCA 2604
Query 27159 ATCTT---GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215
||||| ||| ||| || |||||||| || ||| ||||||| | || | |
Sbjct 2605 ATCTTCGCCTTTACCAG---TTGGACAGTGTCCGTCTGTTCCACTTCTAACGCAATTGTT 2661
Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || |||| || ||||| |||||| ||
Sbjct 2662 TTACCATTCAGTGTCTTCACCTGGATTTGAAT 2693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424408509818040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |