Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5134 114 1e-20 seq40065 93.3 4e-14 seq94648 82.4 6e-11 >seq5134 Length=269 Score = 114 bits (126), Expect = 1e-20 Identities = 177/252 (70%), Gaps = 3/252 (1%) Strand=Plus/Minus Query 130732 AAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAAC 130791 ||||||||| | | || ||||| |||||||| | |||||| || || |||| Sbjct 261 AAGATCTTTAATTAGATATGGATTAACCATTTGAAACTGACCAGCTAGTACTTGTCTTGT 202 Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851 |||||| || ||||| |||||||||||||| ||||| || || | || |||||||| || Sbjct 201 GTAAATATTACTCGTAAACGGTTCAAAGGACTCGTTATTACCAAGTAACTGTGCTGTGGT 142 Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911 ||| || ||||| |||| || | | || || || | | | | | ||| || Sbjct 141 TGCAGTCGGCATTAATGCTACAAGTTGACTGTTTCGCAACTTATACTTTGATATTCTTTC 82 Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971 ||| | || | |||||| |||||| | |||| | || | ||||| ||||||||| Sbjct 81 CTTTAGTTTACCCCAATTCCATAGTTTTGAAGGTGT---TTTTTCCCACAAATCAAATTG 25 Query 130972 TAGTATGCCTTT 130983 ||||| |||||| Sbjct 24 TAGTAAGCCTTT 13 >seq40065 Length=761 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || |||||| | || | | || || || || ||||||||||| Sbjct 564 ACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAATCACTGATAACTCGCTCGTCTTCC 505 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| ||||| | || || | ||||| || |||| |||||||||||||| Sbjct 504 AGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTCAACAGGCAAACCCTCTTTATCGGTA 445 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | || ||||||||||| | ||| || |||| || || | |||| Sbjct 444 ATCTTCGACTTAACCACTTGAACAGTGTCTGTCGGTTCCACGTCTAACGTAATTGTTTTG 385 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| || ||||| || || ||||| Sbjct 384 CCATTCAGTGTCTTCACGAATATATGCAT 356 >seq94648 Length=7301 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||||||||| |||||||| | || | || ||||| | | | |||||||| Sbjct 2485 ACCAGATGTAACGTCGAGTCTTTCTTTATTTCATAATCGCTTAAAATCCTTTCGTCTTCC 2544 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||| |||||||| || || | ||| || | |||||||||||| | || || Sbjct 2545 AATTGTTTGCCGGCGTATATCAGTCTCTGCATGTCTGCAGGCACACCCTCTCTCTCAGCA 2604 Query 27159 ATCTT---GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||| ||| ||| || |||||||| || ||| ||||||| | || | | Sbjct 2605 ATCTTCGCCTTTACCAG---TTGGACAGTGTCCGTCTGTTCCACTTCTAACGCAATTGTT 2661 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || |||| || ||||| |||||| || Sbjct 2662 TTACCATTCAGTGTCTTCACCTGGATTTGAAT 2693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424408509818040