Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq87608 116 5e-21 >seq87608 Length=6889 Score = 116 bits (128), Expect = 5e-21 Identities = 286/427 (67%), Gaps = 10/427 (2%) Strand=Plus/Minus Query 181624 AACCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAA 181683 ||||||| ||||||||||| |||||||| |||||||| || | |||||| |||| Sbjct 3114 AACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAA 3055 Query 181684 AGTCTGGTTCAATGGAGCGTC-CATCATCGTC--CAAG-TAGTTGAGGATCGGGTCATCC 181739 | || || || || || || |||||| ||| || ||||| | |||||||||| Sbjct 3054 ATTCAGGCTC----GATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCC 2999 Query 181740 CGAGGATCAAAGATCTTGCGAGCCTCCTTGGTAAGTTTTGTGAAGATATACCTCGTTTGA 181799 | || || || || || ||| |||| |||| |||||||| | | Sbjct 2998 TGTGGCGAGAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTC 2939 Query 181800 GAAGCGTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTA 181859 | ||||||||| || ||| || ||||| ||||| ||||| || | ||| | |||| Sbjct 2938 GCAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTA 2879 Query 181860 ATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACT 181919 || || || || ||||| | ||| || || | || || | || ||| || Sbjct 2878 ATATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGTTGACATTAGAGACGCT 2819 Query 181920 TCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATT 181979 || ||||| ||||| || || | || | || | |||||| |||||||| |||| Sbjct 2818 TCTCCGTGATGGTATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACC 2759 Query 181980 TCATCTTTGA-GGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAG 182038 || ||||| | ||| | ||||||| |||||||||||| ||||| ||| || | Sbjct 2758 TC-TCTTTTATCGTTACGCTTAAAGCAAGTATACATCACTTTTCTCTGTCCAGGTTTCAA 2700 Query 182039 ACCATCC 182045 ||||||| Sbjct 2699 ACCATCC 2693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627234831132000