Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq87608 93.3 5e-14
seq26117 93.3 5e-14
seq72717 84.2 3e-11
>seq87608
Length=6889
Score = 93.3 bits (102), Expect = 5e-14
Identities = 238/361 (66%), Gaps = 6/361 (2%)
Strand=Plus/Minus
Query 168276 AACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGA 168335
||||||| ||||||||||| || ||||| |||||||| || ||| |||||| || |
Sbjct 3114 AACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATAAA 3055
Query 168336 AGTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCG 168395
| || ||||| || | |||||| | | ||| ||||||| || ||||| |
Sbjct 3054 ATTCAGGCTCGATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTGTG 2995
Query 168396 GATCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACG 168455
| || || |||||||| | ||| ||||||||||||| | | || ||
Sbjct 2994 GCGAGAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAG---GACTCG 2938
Query 168456 CA---TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGA 168512
|| || || || ||| || ||||| ||||||||||| ||| | ||| | || |
Sbjct 2937 CAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTAAGTTAA 2878
Query 168513 TATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTT 168572
|||| || || | |||| | || || |||| ||| || | ||||| |||
Sbjct 2877 TATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGTTGACATTAGAGACGCTT 2818
Query 168573 CACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCT 168632
| ||||| ||||| || | ||| | || | |||||| || |||||||||| ||
Sbjct 2817 CTCCGTGATGGTATGCCGAATGCTCGCCCACCGAACCCGCCAGTTGTGCCACTTTCACCT 2758
Query 168633 C 168633
|
Sbjct 2757 C 2757
>seq26117
Length=267
Score = 93.3 bits (102), Expect = 5e-14
Identities = 179/264 (68%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 104920 TGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 104979
||| |||||||| ||||| ||||||||| || || ||| | || || | |||||
Sbjct 264 TGGAACACCATATATGCTCTACAAAGACAGTTGCAATAGAAAAACAAACCAGATAAATTT 205
Query 104980 GGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 105039
|| || || | || ||| | ||||||||||| | | |||||| ||||||||
Sbjct 204 AGGCACAATAAATTGCTCAAATTTATGTACAGAAATAATACAGTTTACATCTAAAGATGA 145
Query 105040 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 105099
|| | || || ||| | || | ||||| | ||||| ||| ||| | |||
Sbjct 144 GATATCAGTATGCAACTTAGCCACTATCGCATTAAACAAGTTTGTTGATAAGTCAAAAAA 85
Query 105100 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159
|||||| |||| |||| | | |||||||| |||| | | || |||||| || |
Sbjct 84 AACATTTAATTACTTAAAATTAAAGGAAGTTACTAAAATTATTACTGTAAACCTTAATAA 25
Query 105160 AGTTATTGATAGAAATTTTTACCC 105183
| ||||||| | ||||||||| ||
Sbjct 24 AATTATTGACATAAATTTTTATCC 1
>seq72717
Length=3270
Score = 84.2 bits (92), Expect = 3e-11
Identities = 232/352 (66%), Gaps = 8/352 (2%)
Strand=Plus/Minus
Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965
|| ||| | || || |||| |||| |||||||||||||| ||| || ||||| |
Sbjct 594 TCCCAAGCAGAAACAGGTAATCCATTTATGCTTTACAAAGATAGCTGCAATCAAAAAACA 535
Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025
|| ||||| ||| | || || || || ||| | || || ||||| | |||||
Sbjct 534 AACCAAAAAAATATTGGCACAATTAAATGTGGAAATTTATGCACTGAAATTATTCAATTT 475
Query 105026 AC-AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084
| || | || | || | |||| || ||| | || || |||||||| || | ||
Sbjct 474 TCTAGTCCAA-AAGAAATATCTGTTTGCAACTTAGCTTCTATCGCTCTAAATAAATTCGT 416
Query 105085 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 105144
| || | || || || ||| ||| ||||||||| | || || ||||| |||||
Sbjct 415 GAATAAAACAACTAAAACTTTTAATTTTGAAAAACTAAAAAAAATTGTGAAAATAGTCAC 356
Query 105145 CAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAA 105201
||| || || | | |||| |||| ||||| ||||||| | |||| || |
Sbjct 355 AGTAAATCTTAATAAAATTATAGATAAAAATTATTACCCCTTACCTGAGTGTGAAC---T 299
Query 105202 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253
||| || | | ||| || ||||| || | ||||| || ||||| || |||
Sbjct 298 ATCAAACAAAAAACATCGACCAATCGGAGTTGGTGTCCAAGGTCTAGCTGAT 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582520459775800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |