Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq100917 107 2e-18 seq87608 95.1 1e-14 seq87583 95.1 1e-14 >seq100917 Length=15418 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || || || ||||| || || || || || ||| | Sbjct 7559 AATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCGTC 7618 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| ||||||| || ||||||||||||||||| |||||||| || || Sbjct 7619 GGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCA 7678 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | || || ||||| || || | || || | | || ||| || || || Sbjct 7679 GCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTACAA 7738 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | || || || || || |||||||| || |||| || Sbjct 7739 CATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCT 7777 >seq87608 Length=6889 Score = 95.1 bits (104), Expect = 1e-14 Identities = 292/445 (66%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 31963 CGGTCCATTCCA-CACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGC 32021 |||||||||||| ||| || ||| || | || ||| |||| | || ||||| || | Sbjct 2673 CGGTCCATTCCATCAC-TGATGGATGGTTTGAAACCTGGACAGAGAAAAGTGATGTATAC 2731 Query 32022 CTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGC 32081 ||| | ||| ||| || || |||| ||||| || ||| |||| | |||| Sbjct 2732 TTGCTTTAAGCGTAACGATAAAAGAGAGGTGAAAGTGGCACAACTGGCGGGTTCGGTGGG 2791 Query 32082 AGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGC 32141 ||||| |||| || || ||||| || ||||| || | || ||| |||| | || Sbjct 2792 CGAGCATTCGGCATACCATCACGGAGAAGCGTCTCTAATGTCAACTATTATCAATTTAGC 2851 Query 32142 TCAGAACTTTGTCGGTGCAAATAACCTGAACTTAC-TCGAGCCATCTGGACAGTTTGGGA 32200 || |||| |||||| ||||| | ||||||| || | | ||| || |||||||| | Sbjct 2852 CCAAAACTATGTCGGCAGCAATAATATTAACTTACTTCAACCGATC-GGTCAGTTTGGAA 2910 Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCAC 32260 | || || || || || || |||||||| | ||||| ||||| || || | Sbjct 2911 CGCGACTTCAGGGCGGAAAAGACGCTGCGAGTCCTCGTTATATCTTTACAATGCTTAGTC 2970 Query 32261 CTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATG 32320 ||| | | || || |||||| || ||| || || | ||||| | || || | | Sbjct 2971 CTTTGGCCCGAAAAATTTTCTCGCCACAGGATGACCCGCTTCTCAATT---ATCTTTACG 3027 Query 32321 ACGGTCA---GCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGA 32377 ||| | | | ||||||| | || || || | ||||||||| | |||||| Sbjct 3028 ACGATAATTTGAAAATCGAGCCTGAATTTTATGTGCCAATACTTCCGATGGTTCTGGTGA 3087 Query 32378 ACGGTGCAGAAGGCATCGGAACGGG 32402 | || | || || ||||| ||||| Sbjct 3088 ATGGCGGTGAGGGTATCGGCACGGG 3112 >seq87583 Length=5369 Score = 95.1 bits (104), Expect = 1e-14 Identities = 231/350 (66%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 32053 AAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCG 32112 || |||||||| || | || | |||| || || |||| || || ||||| || ||| Sbjct 2227 AAAGTGGCGCAATTGGCTGGTTCTGTGGGCGAACACTCGGCATACCATCACGGAGAAGCG 2286 Query 32113 TCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAAC 32172 |||||| | || ||| | ||| | ||||| | | ||| || |||||| | ||| Sbjct 2287 TCGCTCATGTCTACTATTATAAACTTAGCTCAAGATTATGTTGGAAGCAATAACATAAAC 2346 Query 32173 TTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGC 32232 ||||| | || || || || || || || || || || || ||||| ||||| Sbjct 2347 TTACTTCAACCGAGAGGTCAATTCGGCACACGTCTTCAGGGAGGAAAAGATGCCGCGAGT 2406 Query 32233 TCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGAC 32292 | |||||||||||||| || |||| | || | ||||| || | ||| ||| Sbjct 2407 CCGCGTTACATCTTCACAATGCTAAGCCCTTTGGCGAGAAAGATATTTCCCGCGTGTGAC 2466 Query 32293 GATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGT 32352 || | | || || | | ||| |||||| ||| | |||| |||| | || | Sbjct 2467 GAACCCTTACTTAACTTCCTTTTCGATGACAATCAAAAGATCGAACCGGAATATTATGCT 2526 Query 32353 CCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 ||| | | || ||||| || ||||| || || || || ||||||||||| Sbjct 2527 CCGATATTACCAATGATTTTAGTGAATGGCGCCGATGGTATCGGAACGGG 2576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569586497880400