Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 95.1 8e-15
seq40065 87.8 1e-12
>seq100917
Length=15418
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||||||||| || |||| ||||| ||| || || ||| || || ||||| |||||
Sbjct 7788 CGCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGC 7729
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
||||||| ||||||| | ||||| || || ||||| || ||||| || || || |
Sbjct 7728 TTAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAG 7669
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | ||||||||||| ||| || | || || | || ||||| ||||
Sbjct 7668 GAATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCC 7610
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| | || || || ||||| || | || ||||| || |||||||| |||
Sbjct 7609 ACTTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTG 7556
>seq40065
Length=761
Score = 87.8 bits (96), Expect = 1e-12
Identities = 166/236 (70%), Gaps = 9/236 (4%)
Strand=Plus/Minus
Query 34476 GTCG-CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT 34534
|||| ||||| || || || | |||||||| || ||| || | || | | ||||||
Sbjct 587 GTCGACCGCCACTGAGGCGAACAACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAAT 528
Query 34535 C--TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTC 34592
| ||| | |||||||||||| |||||||| ||||||||||||| | ||||||||
Sbjct 527 CACTGATAAC--TCGCTCGTCTTCCAGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTC 470
Query 34593 CGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA-TAAAATTGTGTCT-TCG 34650
|||| ||||| || || || ||| || | ||||| | | || |||||| |||
Sbjct 469 AACAGGCAAACCCTCTTTATCGGTAATC-TTCGACTTAACCACTTGAACAGTGTCTGTCG 411
Query 34651 CTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || | || || ||||| || | | || ||||| || || |||||
Sbjct 410 GT-TCCACGTCTAACGTAATTGTTTTGCCATTCAGTGTCTTCACGAATATATGCAT 356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314340097039985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |