Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq100917 95.1 8e-15 seq40065 87.8 1e-12 >seq100917 Length=15418 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||||||||| || |||| ||||| ||| || || ||| || || ||||| ||||| Sbjct 7788 CGCCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGC 7729 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||||| ||||||| | ||||| || || ||||| || ||||| || || || | Sbjct 7728 TTAGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAG 7669 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||| ||| || | || || | || ||||| |||| Sbjct 7668 GAATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCC 7610 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| | || || || ||||| || | || ||||| || |||||||| ||| Sbjct 7609 ACTTCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTTG 7556 >seq40065 Length=761 Score = 87.8 bits (96), Expect = 1e-12 Identities = 166/236 (70%), Gaps = 9/236 (4%) Strand=Plus/Minus Query 34476 GTCG-CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT 34534 |||| ||||| || || || | |||||||| || ||| || | || | | |||||| Sbjct 587 GTCGACCGCCACTGAGGCGAACAACCAAATGAAGTGTGGAGTCTCTCTGTACGGTATAAT 528 Query 34535 C--TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTC 34592 | ||| | |||||||||||| |||||||| ||||||||||||| | |||||||| Sbjct 527 CACTGATAAC--TCGCTCGTCTTCCAGTTGTTTGCCGGCAAATATTAGCCTTTGTTGGTC 470 Query 34593 CGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA-TAAAATTGTGTCT-TCG 34650 |||| ||||| || || || ||| || | ||||| | | || |||||| ||| Sbjct 469 AACAGGCAAACCCTCTTTATCGGTAATC-TTCGACTTAACCACTTGAACAGTGTCTGTCG 411 Query 34651 CTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || | || || ||||| || | | || ||||| || || ||||| Sbjct 410 GT-TCCACGTCTAACGTAATTGTTTTGCCATTCAGTGTCTTCACGAATATATGCAT 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314340097039985