Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 132 4e-26
seq44500 89.7 4e-13
seq39385 84.2 2e-11
>seq100917
Length=15418
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || || || || ||| | || || || |||||||| |||||
Sbjct 7560 ATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCGTCG 7619
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || ||||| ||||| || ||||| || || |||||
Sbjct 7620 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 7679
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || |||| ||| |||||||| || |||||| | || | ||||||||||
Sbjct 7680 CAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTACAAC 7739
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || |||||||| | ||| |||| |||| || | || |||
Sbjct 7740 ATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGGC 7787
>seq44500
Length=545
Score = 89.7 bits (98), Expect = 4e-13
Identities = 155/227 (68%), Gaps = 9/227 (4%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| | |||| ||||| || ||| || ||||||||||| |
Sbjct 11 ATGCAGATATTCATCAAAAATCTGATTGGAAAG---------CTGGAAGTGGAACCAAGC 61
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| || || |||| ||||| ||| ||| | || || |||||||| || ||||||||
Sbjct 62 GATTCCATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGCATTCCTCCCGATCAG 121
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || | ||||||| |||| ||||||| | || | |||||||||
Sbjct 122 CAGATACTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACACTCAATGATTACAAC 181
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| | ||||| | || | || ||||||||||| | || || ||
Sbjct 182 ATTGAGAAGGATTGCACACTTCAACTGGTTTTGCGTGTTCGCGGCGG 228
>seq39385
Length=5141
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/155 (68%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || ||||| ||||| ||| | ||||| ||||| |||||||||||
Sbjct 19 ATGCAGATATTCGTGAAGACTCTCACCGGTAAGACGATTACGCTTGAGGTGGAACCGTCN 78
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||||| ||||| |||||||| || ||||||||
Sbjct 79 NNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 138
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
||||| | || | ||| ||||||||| |||||||
Sbjct 139 CAGCGACTGATCTTCGCTGGCAAACAACTGGAAGA 173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434366352638400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |