Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq100917 132 4e-26 seq44500 89.7 4e-13 seq39385 84.2 2e-11 >seq100917 Length=15418 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || || || ||| | || || || |||||||| ||||| Sbjct 7560 ATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCGTCG 7619 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||||| ||||| || ||||| || || ||||| Sbjct 7620 GACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 7679 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || |||| ||| |||||||| || |||||| | || | |||||||||| Sbjct 7680 CAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTACAAC 7739 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || |||||||| | ||| |||| |||| || | || ||| Sbjct 7740 ATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGAGGCGGC 7787 >seq44500 Length=545 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/227 (68%), Gaps = 9/227 (4%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| | |||| ||||| || ||| || ||||||||||| | Sbjct 11 ATGCAGATATTCATCAAAAATCTGATTGGAAAG---------CTGGAAGTGGAACCAAGC 61 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || || || |||| ||||| ||| ||| | || || |||||||| || |||||||| Sbjct 62 GATTCCATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGCATTCCTCCCGATCAG 121 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || | ||||||| |||| ||||||| | || | ||||||||| Sbjct 122 CAGATACTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACACTCAATGATTACAAC 181 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| | ||||| | || | || ||||||||||| | || || || Sbjct 182 ATTGAGAAGGATTGCACACTTCAACTGGTTTTGCGTGTTCGCGGCGG 228 >seq39385 Length=5141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/155 (68%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || ||||| ||||| ||| | ||||| ||||| ||||||||||| Sbjct 19 ATGCAGATATTCGTGAAGACTCTCACCGGTAAGACGATTACGCTTGAGGTGGAACCGTCN 78 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| ||||| |||||||| || |||||||| Sbjct 79 NNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 138 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||||| | || | ||| ||||||||| ||||||| Sbjct 139 CAGCGACTGATCTTCGCTGGCAAACAACTGGAAGA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434366352638400