Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq100917 129 4e-25 seq94648 114 9e-21 seq40065 104 2e-17 seq95989 86.0 4e-12 >seq100917 Length=15418 Score = 129 bits (142), Expect = 4e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || || ||||| || || || ||||| |||||||| || | Sbjct 7557 AAAATGCAGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAGCCG 7616 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | || | || ||||| || || | || || || Sbjct 7617 TCGGACACCATCGAGAATGTGAAGGCGAAGA-TTCAGGACAAGGAGGGCATTCCTCCTGA 7675 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||||| || ||||| || |||||||| | ||||||| | | || || ||||||| Sbjct 7676 TCAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGATTA 7735 Query 23787 CAACATACAAAAAGAGTCCACATTACAT 23814 ||||||||| |||||||| ||| | ||| Sbjct 7736 CAACATACAGAAAGAGTCGACACTTCAT 7763 >seq94648 Length=7301 Score = 114 bits (126), Expect = 9e-21 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || ||||| || | | || ||||| || || | || || || | || Sbjct 5293 AATGCAGATCTTTGTTAAGACATTGAATGGCAAAACTATTACGTTAGACGTGGAACCGAC 5234 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| |||| || | |||| ||| ||||| || ||||| | | || || || Sbjct 5233 AGACAGTGTTCAACTGGTAAAGTCAAAGATTGCCGATAAAGAGAGCATTCCTGTTGACCA 5174 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | ||||||| |||||||||||||||||||||||| |||| ||||||| || Sbjct 5173 GCAAAGACTGATATTTGGCGGCAAACAACTGGAAGACGAACGAGTTTTAAGCGATTATAA 5114 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 | |||| |||||||| ||| | || |||||| Sbjct 5113 CGTACAGAAAGAGTCGACACTTCACTTAGTT 5083 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||||||||||| || | |||| || |||||||| | ||| ||||| || |||| Sbjct 2636 ACGGACACTGTCCAACTGGTAAAGGCGAAGATTGCTGAGAGAGAGGGTGTGCCTGCAGAC 2577 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||| | | |||| |||||||||||| ||||||||||| | | |||| ||||||| Sbjct 2576 ATGCAGAGACTGATATACGCCGGCAAACAATTGGAAGACGAAAGGATTTTAAGCGATTAT 2517 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820 | ||| | ||||| || || |||||| | ||| Sbjct 2516 GAAATAAAGAAAGACTCGACGTTACATCTGGTT 2484 >seq40065 Length=761 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23609 AAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCA 23668 ||||||| || ||||| || || || | || ||||| || || | || || || | | Sbjct 354 AAATGCATATATTCGTGAAGACACTGAATGGCAAAACAATTACGTTAGACGTGGAACCGA 413 Query 23669 CGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 | ||||||||| || | | || || ||| | || ||||| ||| | || || | Sbjct 414 CAGACACTGTTCAAGTGGTTAAGTCGAAGATTACCGATAAAGAGGGTTTGCCTGTTGACC 473 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | ||||||||||||||||||||||||||||||| || | | | ||||| | Sbjct 474 AACAAAGGCTAATATTTGCCGGCAAACAACTGGAAGACGAGCGAGTTATCAGTGATTATA 533 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 | |||| | ||| |||||| | ||||| ||| Sbjct 534 CCGTACAGAGAGACTCCACACTTCATTTGGTT 565 >seq95989 Length=12046 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778 || || ||||| || || || ||||| || ||||||||||| || || | |||||||||| Sbjct 12046 CCTCCCGATCAGCAACGATTGATATTCGCAGGCAAACAACTAGAGGATGGACGCACTTTA 11987 Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 | ||||| ||||| |||||||| || || | ||||| ||| | | | |||||||| Sbjct 11986 AGTGATTATAACATCCAAAAAGAATCTACTCTTCATTTGGTTCTTCGTCTCAGAGGAGGA 11927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337591286184860