Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq96803 280 1e-70 seq67252 232 6e-56 seq50692 145 7e-30 seq95281 98.7 8e-16 seq77187 98.7 8e-16 >seq96803 Length=7468 Score = 280 bits (310), Expect = 1e-70 Identities = 575/847 (68%), Gaps = 12/847 (1%) Strand=Plus/Minus Query 4255 ATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATAT 4314 ||||||| ||||| ||||| |||||||| |||||| |||| ||||| || ||||| | Sbjct 4144 ATTTTTGATATTCTCCAACTCGTTTTTCGAAAAAATTACTTTTTCCTTCCAATGAAATTT 4085 Query 4315 TTTCCATAAAATCAAACGGATTAGTTGCGT-TGTAATGTTTTTC-ACACTTTAGAGCTAC 4372 |||||||||||||| || || || || || ||| ||||| ||| | || | | Sbjct 4084 GCTCCATAAAATCAAAAGGGTT--TTCCGACTGAAATATTTTTGGACAATCTAATTCCAT 4027 Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432 || | | ||||| || |||| || ||||| |||||||| ||| || || ||||| Sbjct 4026 GAGAAGTTTATCAGCAACGTATTCAATGTACTGTTTCATGAGTGAGCAATTCATGCCAAT 3967 Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 ||| | || || || || | | ||| |||||||| || ||||||||| || Sbjct 3966 TAAACGAACTGGCAGAGCATCCACTAGAAATTCTTGTTCAATTAAAACGGCTTCTCGAAT 3907 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCC---AAACAATAAACA 4549 || || ||||||||| | ||||| || | ||||| ||| | || ||| Sbjct 3906 AATTTCGACTATTTTATCCTCGCTCGGTTTGTTGCGAATGTATCGTCGAAATACTAGACA 3847 Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609 |||||||||||||| || ||||| || | ||| ||||| || ||| || || || Sbjct 3846 TGCAAAATCACAATGTAATCCTTCATCACGAGAAATTAGTTCATTGCTAAAAGTCAAACC 3787 Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669 | | || || | | ||||| ||||||||||| ||||| || ||| ||| ||||| Sbjct 3786 ACGTAATATTCCGCGTTGTTTAATCCAAAATATAGATGCAAACGAACCACTAAAAAATAT 3727 Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCG-GGACCCGAACGAGCTGGCTTTGTCTTTAA 4728 ||||| || || || || || ||||| || | | || |||| || | || Sbjct 3726 CCCTTCAACAGCAGCGAATGCAACTAAACGTTCAGCAAAAGAAGCT-AAATTATTAGAAA 3668 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| ||||||||| | || |||||||| || || || || || | || || |||| Sbjct 3667 TCCAGCGTAATGCCCATTGTGCCTTTTTCTTGACACATGGTATCGTTTCAATTGCATTAA 3608 Query 4789 ATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTT 4848 |||| || |||| | ||| | |||||| || | | |||| |||||||| Sbjct 3607 ATAAAAGCATTCTTTCTTTTTTGTCATCAATATACGTTTGCAAAAGTAATGAATACATTT 3548 Query 4849 CAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTT 4908 | ||||| | ||| || || ||||| |||||||| |||||||| | |||||||| || | Sbjct 3547 CTGAATGCACATTCTCAATCGCAATTTGAAATCCATAAAAGCAACGTGCTTCTGTAACCT 3488 Query 4909 GAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAA 4968 |||| || ||||| ||| | | ||||| || || | || ||||| || |||| Sbjct 3487 GAACCTCTCGTATAAATCGTTCAGCAAGATTTTCATTAACAACTCCATCACTAGCGGCAA 3428 Query 4969 AAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTT---TCCAGT 5025 |||| || | || || |||| || |||| || || || | ||| | |||| | Sbjct 3427 AAAATGCAAGAATATACGATAAGAAACGTCGTTCATCCGGGTTTAATTTATTGATCCAAT 3368 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085 | ||| |||||||||||| || || |||||||| || |||| ||||||| Sbjct 3367 CAGCACGATCACGTCCTAAATCAACTTCCTCTACTGTCCAAAATGAAGCTTGAGCTTTTT 3308 Query 5086 TGTACAT 5092 ||||||| Sbjct 3307 TGTACAT 3301 >seq67252 Length=1665 Score = 232 bits (256), Expect = 6e-56 Identities = 474/691 (69%), Gaps = 20/691 (3%) Strand=Plus/Plus Query 4454 TGTCAAAAACTCTTGTTCTATAGTTACGGCTTC-TGTGATTATATCTTTTATTTTATCTT 4512 ||||||||| |||| ||| ||| | || ||||| ||| || || | ||||||| | Sbjct 680 TGTCAAAAATTCTTTTTCAATAATAACAGCTTCCTGT-ATAATTTTCAAGATTTTATTAT 738 Query 4513 TAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTT 4572 || ||||| ||| ||| ||| ||| |||| ||| ||||||||||| || | |||| Sbjct 739 TATTGGGTTTGTTTTTTAAATATTTAAATAATAGACATGCAAAATCACAGTGAAGGCCTT 798 Query 4573 CGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAA---CCTCTCTTTT 4629 | ||||| ||| ||||||||| |||||| || ||||| || | | || Sbjct 799 CATCTCTTGAAATAAGTTCGTTACTTTGCGTTAAACCAT---TTAAAATTCCACGTTCTT 855 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | | |||| | ||||| |||||||| ||| ||| || || ||||| || || ||||| | Sbjct 856 TTATCCAATAAATAGCAGCAAATGAACCACTAAAAAAAATTCCTTCAACAGCAGCAAATG 915 Query 4690 CTACTAATCGGGACCCGAA-CGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748 | || | || || || | | | | ||| || || ||||||||||||||||| | Sbjct 916 CCACGAGTCTCTCTCCAAAGCTAACATGTTTT-TCATTTATCCATTTTAATGCCCATTCG 974 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAAT 4808 |||||||| |||| ||| ||| | | || | || | ||| || ||| || | | Sbjct 975 GCTTTTTTTTTAATGCAACTAATATTATGGATTGAATTTATTAAGGTATTTTGTTTATCT 1034 Query 4809 GGGTCTTGAATATAAGTGTCTAT--TAGTAGGCTATACATTTCAGAATGTATATTTTCTA 4866 |||| ||| ||||| || || || || |||||||| || ||||||||||| | Sbjct 1035 TTATCTTTAATG--AGTGTATACAATAATAAACTGTACATTTCTGAGTGTATATTTTCAA 1092 Query 4867 TAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 ||||| || || || || |||||||| ||||| | | |||||| || |||||| Sbjct 1093 CTGCAATTTGCAAACCATAGAAGCATCTTGCTTCACTAATTTGAACATCACATAAAAATC 1152 Query 4927 TTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAG 4986 ||||| | || |||||||| ||||| |||||||| | ||||||||| || | || || || Sbjct 1153 TTTCTGCCAAATTTTCGTTGACTATTCCGTCACTTGTTGCAAAAAAAGCGAGAATATAAG 1212 Query 4987 ATATAAAGT-ACTGT--TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTA 5043 | | ||||| || | | ||| ||| || | ||| | ||||||| | Sbjct 1213 AAAAAAAGTGTCTTTCATTTTCA--CTT-AGAAGTAACCAATCATTGTAATCTTTTCCCA 1269 Query 5044 AATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATAT 5103 |||| |||||||| |||||||| | | || |||||||| |||||| ||| | || Sbjct 1270 AATCTACTTCTTCCACAGTCCATATACAAGCCAAAGCTTTTTTATACATATTCCACAAAT 1329 Query 5104 CAGGATACTGAATCGGAAGTATGACAAATCT 5134 | ||||| || || ||| ||||||| Sbjct 1330 CCACATACTCGATAGGGTATATTGCAAATCT 1360 >seq50692 Length=412 Score = 145 bits (160), Expect = 7e-30 Identities = 241/348 (69%), Gaps = 4/348 (1%) Strand=Plus/Plus Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 |||||||||| |||| ||| | |||||||| ||| || || | | || | Sbjct 65 CTTTAATCCAAGACAATGACCATTCTGCTTTTTTTCTAATACAGTCAAAATTTTCAATTG 124 Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 |||| | || || || ||| ||| |||| ||| |||| | || |||| |||| Sbjct 125 CGTTTATCAAAATATTTCTTTTTAATTCGTCTGTTATAAAAGTTTGTAAAAGTAAACTAT 184 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAA----AGCATCTAGCT 4898 ||||||||| || | |||||| || ||||| ||||| || |||| | || | |||| Sbjct 185 ACATTTCAGCGTGAACATTTTCAATTGCAATTTGAAAACCATAAANAAAAACAACGAGCT 244 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 || ||| || || || | |||||||||| |||||||||||||||| || || ||| Sbjct 245 TCGTTTATTTTGACATCTCTTAAAAATCTTTCGGCTAAGTTTTCGTTTACAATTCCATCA 304 Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT 5018 || | ||||| || || | | ||||| | ||||| ||||| | | || || Sbjct 305 CTTGTGGCAAAGAAAGCAAGTATGTGAGACAAAAAGTTTTGTTCATTTATAGTTAGACTT 364 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAA 5066 | ||| | | |||||||||| ||||||||| |||||||| |||||| Sbjct 365 TGCCAATCAGTCAAATCTTTACTTAAATCAATCTCTTCAACTGTCCAA 412 >seq95281 Length=916 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/207 (72%), Gaps = 9/207 (4%) Strand=Plus/Minus Query 31805 GGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTTAA---ACACTTTATCGAC 31861 || ||||| || ||||| || ||||| ||||| || ||| ||| | ||||| | Sbjct 865 GGATGCTATGGTCGAATCGCACCTAGGTCTGGGTTAGCA-TTAGCTTATTCTTTAA--AT 809 Query 31862 GTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAAT 31921 || || |||||||||||| |||| |||| |||||| ||||||||| |||| |||||| Sbjct 808 GTTTTGGCTGGTGTTATAGATCCAGATTATAAAGGAAATGTTGGAATTTTGTTATTTAAT 749 Query 31922 TTTGGAGAAAAATCATACAGTATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA 31981 |||||||||| | || ||| |||| ||||| || || |||||||| | | | Sbjct 748 CATGGAGAAAAAGATTTTGAAATTAAACAGGGTGATAGAGTTGCACAACTAATAT-TGGA 690 Query 31982 AAAATAGAAATGCCCCAAATAGAAGTA 32008 || || || || || ||||||||| Sbjct 689 GAAGTATAAGTG--TCATATAGAAGTA 665 >seq77187 Length=4015 Score = 98.7 bits (108), Expect = 8e-16 Identities = 185/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| || ||| || || |||| || || |||| | |||||| || |||||||| Sbjct 3234 AGCAGTCTGTCCGCAACGTATTCAATGTAAGTTTTCATTAATTCGCAATTCATTCCAATG 3175 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | |||| || | ||| | || || || || ||||||||| || || || | || Sbjct 3174 AGATTCACGGGCAACGCATCGGTTAAGAATTCCTGTTCTATAAGCACCGCCTCCTTAATA 3115 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || | | | | || | | | || || || | | ||| |||| ||||||||| Sbjct 3114 ATTTGGGCGACTCTTTCCTGATAGGGCTTGTTCTCGATGTACTTGAACAGCAAACACGCA 3055 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 ||||| ||||| | |||||||| | ||||||||| || |||||||| || ||| Sbjct 3054 AAATCGCAATGAAGCCCTTCGTCGCGCGAAATCAGTTCATTGCTGAACGTTAAACCAGGC 2995 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGC 4645 || | |||| |||||| ||||||||||| || Sbjct 2994 ATAAGTCCTCGCTTTTTGAGCCAAAATATGGC 2963 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 || || || || |||| || || | ||||||||| || ||||| | |||||| || || Sbjct 2728 TCGTGGATGTATGTGTTAATAAGCAAGCTATACATCTCCGAATGAACATTTTCGATGGCG 2669 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 || ||||| || ||||| || | |||||||||||||||||||| Sbjct 2668 ATTTGAAAGCCATAAAAACAACGCGCTTCTGTTACTTGAACTTC 2625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426521092089485